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UnknownNetwork Pharmacology and Metabolomics Studies on Antimigraine Mechanisms of Da Chuan Xiong Fang (DCXF).
Not available
S-EPMC8081595 | biostudies-literature
MetabolomicsGut microbiota production of trimethyl-5-aminovaleric acid reduces fatty acid oxidation and accelerates cardiac hypertrophy
Numerous studies found intestinal microbiota alterations which are thought to affect the development of various diseases through the production of gut-derived metabolites. However, the specific metabolites and their pathophysiological contribution to cardiac hypertrophy or heart failure progression ...
2021-12-08 | MTBLS3174 | MetaboLights
ProteomicsComprehensive Dataset of Interactors for the Entire PARP Family Using TurboID Proximity Labeling
We present a comprehensive proteomic dataset of binding proteins for all 17 members of the poly(ADP-ribose) polymerase (PARP) family, generated using the TurboID proximity labeling technique in HEK293T cells under controlled conditions. This dataset encompasses 6,325 proteins that interact with PARP...
ORGANISM(S): Homo sapiens (Human) 
2024-07-15 | PXD052745 | Pride
Human Interactome Parp Turboid 
UnknownIonizing radiation promotes lung injury by inducing ferroptosis-driven senescence in epithelial cells via NCOA4-mediated ferritinophagy
Not available
S-EPMC12945525 | biostudies-literature
UnknownChinese herbal medicines in the treatment of ulcerative colitis: a review.
Not available
S-EPMC8981751 | biostudies-literature
ProteomicsCTDP1 and RPB7 Stabilize Pol II and Permit Reinitiation
The mechanisms governing the termination and subsequent reinitiation of RNA polymerase II (Pol II) remain poorly understood. Here we found that depletion of RPB7 leads to the destabilization of Pol II’s largest subunit, RPB1. This destabilization is influenced by the loop regions of RPB7, CDK9, the ...
ORGANISM(S): Mus musculus (Mouse) 
2025-02-05 | PXD048909 | Pride
Label-free ms Ctdp1 Rpb7 Rpb1-turboid 
ProteomicsTurnip succinylation modification
Quantitative succinyl-proteome profiling of turnip (Brassica rapa var. rapa) in response to cadmium stress.
ORGANISM(S): Brassica rapa var. rapa 
2022-08-11 | PXD028098 | Pride
Succinylation Turnip Lc-ms/ms 
MetabolomicsMetabolic reaction network-based recursive metabolite annotation for untargeted metabolomics (Aging fruit fly negative mode)

Large-scale metabolite annotation is a challenge in liquid chromatogram-mass spectrometry (LC-MS)-based untargeted metabolomics. Here, we develop a metabolic reaction network (MRN)-based recursive algorithm (MetDNA) that expands metabolite annotations without the need for a comprehensive standard...

2019-03-26 | MTBLS615 | MetaboLights
MetabolomicsGut microbiota-driven regulation of queen bee ovarian metabolism

With the global prevalence of Varroa mites, more and more beekeepers resort to confining the queen bee in a queen cage to control mite infestation or to breed superior and robust queen bees. However, the impact of such practices on the queen bee remains largely unknown. Therefore, we sub...

2023-09-11 | MTBLS7576 | MetaboLights
TranscriptomicsDevelopmental transcriptomics of the model caterpillar fungus Cordyceps militaris
The RNA-Seq technique was used to investigate the differentially transcribed genes of the caterpillar fungus Cordyces militaris. It was calculated that >63% of total annotated genes were expressed, including >55% of putative pathogen-host interaction genes. Overall, the fruiting-body development and...
ORGANISM(S): Cordyceps militaris 
2011-11-08 | E-GEOD-28001 | biostudies-arrayexpress
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