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ProteomicsShotgun Imaging Analyzer Gastric Cancer
The data discloses mass spectra of a gastric cancer biopsy sectioned into ten parts, each one subjected to a four step MudPIT analysis (i.e., increasing KCL concentrations of 85, 150, 250, and 400 mM). The biopsy was acquired from an area along the stomach that included tumor and resection margin, d...
ORGANISM(S): Homo sapiens (Human) 
2013-12-05 | PXD000584 | Pride
Gastric cancer lc/lc/ms/ms 
ProteomicsA multi-protease, multi-dissociation, bottom-up-to-top-down proteomic view of the Loxosceles intermedia venom
Venoms are a rich source for the discovery of molecules with biotechnological applications, but their analysis is challenging even for state-of-the-art proteomics. Here we report on a large-scale proteomic assessment of the venom of Loxosceles intermedia, the so-called brown spider. Venom of 200 sp...
ORGANISM(S): Loxosceles intermedia 
2017-05-16 | PXD005523 | Pride
Venom loxosceles intermedia 
ProteomicsSpectral Cruncher: A Visualization Tool Integrating Manual Curation, Ion-Intensity Prediction, and De Novo Tag Generation
Here's a suggested Project Description for your PRIDE submission: Project Description This dataset contains mass spectrometry raw files used as training data for SpecFormer, a transformer-based ion intensity prediction model integrated within PatternLab for Proteomics (Spectral Cruncher module). Th...
ORGANISM(S): Mus musculus (Mouse) Homo sapiens (Human) 
2026-02-16 | PXD069898 | Pride
Ion intensity prediction Multi-species omics Single-cell proteomics 
ProteomicsAn Evaluation of the Crystal Structure of C-terminal Truncated Apolipoprotein A-I in Solution Reveals Structural Dynamics Related to Lipid Binding
Apolipoprotein (apo)A-I mediates many of the anti-atherogenic functions attributed to high density lipoprotein (HDL). Unfortunately, efforts toward a high-resolution structure of full-length apoA-I have not been fruitful, though there have been successes with deletion mutants. Recently, a C-terminal...
ORGANISM(S): Homo sapiens (Human) 
2017-05-30 | PXD006574 | Pride
Apolipoprotein Mass spectrometry (ms) Structural biology Oligomerization Small-angle x-ray scattering (saxs) Structural model 
ProteomicsCortical Organoids Exposed to Human Milk Oligosaccharides
We verify the alterations the the proteome profile of organoids exposed to different concentrations of milk oligosaccharides.
ORGANISM(S): Homo sapiens (Human) 
2026-03-16 | PXD064071 | Pride
Human milk Oligosaccharides Cortical organoids 
ProteomicsProteomic dataset of MECP2-deficient and wild-type human brain organoids under spaceflight and ground conditions
This dataset presents deep proteomic profiles of human brain organoids cultured aboard the International Space Station (ISS) and on Earth. We analyzed MECP2-deficient (Q83X) and isogenic wild-type control (WT83) organoids exposed to spaceflight and ground conditions for 30 days. Using LC-MS/MS on an...
ORGANISM(S): Homo sapiens (Human) 
2026-02-09 | PXD069807 | Pride
Astrocytes Proteomics Brain organoids L1 retrotransposition Mecp2 Microgravity Retrotransposons Neurodegeneration Senescence 
ProteomicsHs_Brain_ALT
Proteome analyses of the human anterior temporal lobe
ORGANISM(S): Homo Sapiens (human) 
2014-12-31 | PAe005152 | PeptideAtlas
ProteomicsHs_Brain_CC
Proteome of the Human Corpus Callosum
ORGANISM(S): Homo Sapiens (human) 
2014-12-31 | PAe005151 | PeptideAtlas
UnknownTranscriptome of Two Canine Prostate Cancer Cells Treated With Toceranib Phosphate Reveals Distinct Antitumor Profiles Associated With the PDGFR Pathway.
Not available
S-EPMC7726326 | biostudies-literature
ProteomicsProteogenomic Analysis Reveals Proteins Involved in the First Step of Adipogenesis in Human Adipose-derived Stem Cells
Background: Obesity is characterized as a disease that directly affects the whole-body metabolism and is associated with excess fat mass and several related comorbidities. Dynamics of the adipocyte hypertrophy and hyperplasia play an important role in health and disease, especially in obesity. Human...
ORGANISM(S): Homo sapiens (Human) 
2022-02-17 | PXD026299 | Pride
Differentiation Protein Adipogenic Mrna. Hasc Proteogenomics 
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