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ProteomicsGalactan polymerization in mycobacteria requires cell wall components
Galactan polymer is a prominent component of the mycobacterial cell wall core. Its biogenesis starts at the cytoplasmic side of the plasma membrane by a build-up of the linker disaccharide [rhamnosyl (Rha) – N-acetyl-glucosaminyl (GlcNAc) phosphate] on the decaprenyl-phosphate carrier. This decapren...
ORGANISM(S): Mycobacterium smegmatis MC2 51 
2024-02-15 | PXD046591 | Pride
Enzyme fraction M. smegmatis Cell envelope Glft1 Proteome 
ProteomicsProteins modulated during persistent lymphocytic choriomeningitis virus infection
The experimental data indicate that during a persistent infection, lymphocytic choriomeningitis virus (LCMV) may both directly or indirectly modulate the regulatory cellular processes and alter the cellular functions that are not critical for the survival, but are needed for the homeostasis in the o...
ORGANISM(S): Homo sapiens (Human) 
2019-11-15 | PXD005205 | Pride
Lcmv Arenavirus Peroxiredoxins Host response 2d-dige 
ProteomicsPeculiar proteome of dark-cultivated Euglena gracilis
Euglena gracilis is a flagellate photosynthetic microalga that, thanks to its metabolic adaptability, can grow under both autotrophic and heterotrophic conditions. We focused on the proteome of E. gracilis cultivated in Cramer-Myers medium in dark and light conditions. Cultures grown in the light sh...
ORGANISM(S): Euglena gracilis 
2025-03-06 | PXD058143 | Pride
Microalga Stress Β-oxidation of fatty acids Photosynthetic pigments Proline 
ProteomicsComparative proteomics of clinically relevant proteins in modern and traditional bread wheat cultivars
Bread wheat (Triticum aestivum L.) is one of the most valuable cereal crops for the human consumption. Its grain storage proteins greatly impact bread quality, though may cause food intolerances or allergies in susceptible individuals. Consequently, the investigation of a proteome polymorphism among...
ORGANISM(S): Triticum aestivum (Wheat) 
2020-05-20 | PXD012940 | Pride
Grain Cereal allergens Two-dimensional gel electrophoresis Mass spectrometry Food quality Triticum aestivum 
ProteomicsCucumber mosaic virus resistance: Comparative proteomics of contrasting Cucumis sativus cultivars after long-term infection
Plant viruses are a major threat for a wide range of host species, causing substantial losses in agriculture. Particularly, Cucumber mosaic virus (CMV) evokes severe symptoms, thus dramatically limiting yield. Activation of plant immunity is associated with changes in the gene expression and consequ...
ORGANISM(S): Viruses Cucumis sativus Cucumber mosaic virus 
2020-01-09 | PXD015088 | Pride
Label-free quantification Electron transport Protein network Photosynthesis Cmv Oxidative stress 
ProteomicsTolerant Coxiella burnetii survives doxycycline stress: Proteomics reveals crucial mechanisms
Coxiella burnetii is an intracellular pathogen that causes Q fever, a zoonotic disease found worldwide. In humans, the bacterium is responsible for an acute and chronic disease. It is transmitted to humans by the inhalation of aerosols or contaminated dust containing bacteria from infected livestock...
ORGANISM(S): Coxiella burnetii RSA 331 
2019-08-14 | PXD010250 | Pride
Axenic medium Two-dimensional gel electrophoresis Q fever Enzymatic antioxidants Antibiotic Cell envelope homeostasis 
ProteomicsWheat Allergens MALDI-TOF/TOF - Using 7 cm immobilized pH gradient strips to determine levels of clinically relevant proteins in wheat grain extracts
The aim of the work was to test relatively simple proteomics approach based on phenol extraction and two-dimensional gel electrophoresis (2-DE) with 7cm immobilized pH gradient strips for the determination of clinically relevant proteins in wheat grain. Using this approach, 157 2-DE spots were quan...
ORGANISM(S): Triticum aestivum (Wheat) 
2017-08-23 | PXD002067 | Pride
Grain Maldi-tof/tof Allergen Gel-based quantification Triticum aestivum 
ProteomicsSomatic embryogenesis of Pinus nigra
There are several issues complicating somatic embryogenesis in conifers, for instance the low initiation frequency, the weak maturation capacity, and the loss of an embryogenic potential after a prolonged cultivation. The aim of our study was to clarify molecular details of the this process in the t...
ORGANISM(S): Pinus nigra 
2017-09-06 | PXD004611 | Pride
Cell wall biosynthesis  conifers  embryogenic tissue  loss of maturation capacity  non-embryogenic callus  2-d gel electrophoresis 
ProteomicsCherry Adapted Plum Pox Virus (PPV) CR Isolate Alters the Abundance of Proteins Involved in Photosynthesis and Stress-response of the Experimental Herbaceous Host Nicotiana benthamiana More Aggressively than the Mild PPV-C Isolate
Plum pox virus (PPV, family Potyviridae) is one of the most important viral pathogens of Prunus spp. causing considerable damage to stone-fruit industry worldwide each year. Among the PPV strains identified so far, only PPV-C and PPV-CR are able to infect cherries under natural conditions. Herein, w...
ORGANISM(S): Nicotiana benthamiana Plum pox virus 
2018-08-13 | PXD010018 | Pride
Tobacco Lc-ms Compatible interaction Photosynthesis Sharka Ppv Label-free quantification Antioxidants 
ProteomicsComparative proteomic and metabolomic analysis of human osteoblasts differentiated from dental pulp stem cells
The current global situation points to the trend of the aging population. Along with the growth of population diseases, the pressure to develop new cell-based or drug-based therapies is increasing. One from main challenges in the field of regenerative medicine is large bones healing and osteoporosis...
ORGANISM(S): Homo sapiens (Human) 
2021-09-10 | PXD025223 | Pride
Osteodifferentiation Bone metabolism Signaling pathways Mineralization phase Homo sapiens Label-free quantification Nmr Late osteoblast 
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