Erc1 - OmicsDI

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Transcriptomics (89)
Unknown (34)
Genomics (21)
Proteomics (3)
Metabolomics (1)

Organisms

Mus musculus (65)
Homo sapiens (18)
Saccharomyces cerevisiae (8)
Gallus gallus (3)
Phocaeicola vulgatus (3)
Bacteroides uniformis (3)
Pochonia chlamydosporia (3)
Aurantivirga (3)
Meleagris gallopavo silvestris (3)
Zingiber officinale (3)
Polaribacter sp. (3)
Segatella copri (3)
Parabacteroides merdae (3)
Mediterraneibacter gnavus (3)
Eupolyphaga sinensis (3)
Collinsella aerofaciens (3)
Klebsiella aerogenes (3)
Lactobacillus acidophilus (3)
Clostridium sporogenes (3)
Rubus chingii var. suavissimus (3)
synthetic construct (2)
Pseudomonas aeruginosa (2)
Mus musculus castaneus (1)
Sulfolobus acidocaldarius (1)
Streptococcus gordonii (1)
Mus musculus domesticus (1)
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Apis mellifera mellifera (1)
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Escherichia coli (1)

Repository

biostudies-arrayexpress (110)
pride (3)
MetaboLights (1)

Tissue

Seedling (2)
Melanocyte (1)

Disease

Normal (2)
Skin melanoma (1)

Technology Type

Affinity purification coupled with mass spectrometry proteomics (3)
Mass Spectrometry (3)
Mass spectrometry (1)
Data-dependent acquisition (1)

Instrument Platform

NextSeq 2000 (7)
Illumina HiSeq 2500 (7)
Illumina NovaSeq 6000 (6)
Illumina MiSeq (4)
NextSeq 500 (4)
NextSeq 550 (3)
Illumina HiSeq 2000 (3)
Illumina HiSeq 4000 (3)
Element AVITI (2)
PromethION (2)
GeneChip Scanner 3000 7G (2)
GenePix Personal 4100A [Axon Instruments] (2)
MSI GP76 Leopard 10UE-060ES Intel Core i7-10870H/16GB/1TB SSD/RTX 3060/17.3\ (1)
Manual protocol (1)
ScanArray Express HT [PerkinElmer] (1)
GenePix 4000B [Axon Instruments] (1)
Sony SH800S (1)
N/A (1)
DNBSEQ-G400 (1)
Illumina HiSeq 1000 (1)
Illumina HiSeq 1500 (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2014 (17)
2015 (14)
2026 (13)
2024 (10)
2008 (9)
2012 (7)
2010 (7)
2011 (6)
2018 (4)
2025 (4)
2023 (3)
2019 (3)
2016 (3)
2013 (3)
2007 (3)
2005 (3)
2006 (2)
2022 (1)
2021 (1)
2020 (1)

Metabolite Name

Thr-Pro-Arg (1)
Thr-Gly-Arg (1)
Ser-Asp-Arg (1)
Pyroglu-Asn-Arg (1)
L-valine, n-[[1-(5-fluoropentyl)-1h-indol-3-yl]carbonyl]-, methyl ester (1)
Cys-His-Arg (1)
5-methoxy-4-methyl-3-phenylcoumarin (1)
4-phenylbutan-2-ol (1)
3-quinolinecarboxamide, 1,4-dihydro-8-methoxy-4-oxo-1-pentyl-n-tricyclo[3.3.1.13,7]dec-1-yl- (1)
2-methyl-6(s)-(3-pyridyl)tetrahydro-1,2-oxazine (1)
2-furancarboxylic acid, 5-[3-[4-[2-(4-fluorophenyl)ethoxy]phenyl]propyl]- (1)
1h-indole-3-carboxylic acid, 1-(5-fluoropentyl)-, 8-quinolinyl ester (1)
[1,1':4',1''-terphenyl]-3,4'',5-triol (1)
[[4-[5r-chloro-2z-[3r-cyclohexyl-3s-hydroxy-1r-propenyl]-3s-hydroxycyclopentyl]-2r-butenyl]oxy]-acetic acid, isopropyl ester (1)
(s)-n-(1-amino-1-oxo-3-phenylpropan-2-yl)-1-pentyl-1h-indole-3-carboxamide (1)
(3as,5r,5as,8as,9ar)-5,8a-dimethyl-1-methylidene-3a,4,5,5a,6,7,9,9a-octahydroazuleno[6,7-b]furan-2,8-dione (1)
L-myo-inositol-1,4,5-triphosphate (1)
Arg-asp (1)
2-hdeahpda [dmed-fahfa] (1)
Mepirapim (1)
Tyr-His-Arg (1)
Solasodine base + 2h, 1o, o-hex-hex-hex (1)
Cyanidin 3-o-[2''-o-(xylosyl)-6''-o-(p-o-(glucosyl)-p-coumaroyl) glucoside] 5-o-glucoside (1)
Combrestatin a4 (1)
6-oxomometasone furoate (1)
(z)-2-octylpent-2-enedioic acid (1)
Cocamidoprpylbetaine (1)
Ser-Ser-Arg (1)
Glycerol trioleate (1)
.alpha.-galactosyl-n-stearoylsphingosine (1)

Study type

Transcription profiling by array (38)
RNA-seq of coding RNA (19)
ChIP-seq (11)
RNA-seq of coding RNA from single cells (7)
Methylation profiling by high throughput sequencing (7)
Other (6)
ChIP-chip by tiling array (4)
RNA-seq of non coding RNA (4)
DNA-seq (3)
RNA-seq of total RNA (3)
Transcription profiling by RT-PCR (2)
ATAC-seq (2)
Animal - One-color microarray (1)
Animal - High-throughput sequencing (1)
MicroRNA profiling by array (1)
CUT&RUN (1)

Release Date

2014 (17)
2024 (15)
2026 (14)
2015 (14)
2008 (9)
2019 (7)
2016 (7)
2012 (7)
2010 (7)
2025 (7)
2018 (6)
2011 (6)
2023 (5)
2020 (4)
2022 (3)
2013 (3)
2007 (3)
2005 (3)
2017 (3)
2021 (2)
2006 (2)

Lab affiliation

CRUK Scotland Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD Department of Biochemistry, University of Cambridge, Cambridge, CB2 1GA, UK (1)
Carnegie Institution at Stanford (1)
Carnegie Mass Spec Facility (1)

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Proximity labeling – LC/MS-MS with ERC1-TurboID/atg7-2 Arabidopsis seedlings

Given that ERC1 proteins are enriched on membraneless condensates together with ATG8 proteins prior to autophagosome formation, we hypothesized that ERC1-positive condensates might serve as an assembly site for ATG8 proteins and other adaptors before ATG8 proteins are conjugated onto the phagophore ...

ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress)

2025-10-07 | PXD067354 | Pride

CYRI-B loss promotes enlarged mature focal adhesions and restricts microtubule and ERC1 access to the cell leading edge

CYRI proteins promote lamellipodial dynamics by opposing Rac1-mediated activation of the Scar/WAVE complex. This activity also supports resolution of macropinocytic cups, promoting internalisation of surface proteins, including integrins. Here, we show that CYRI-B also promotes focal adhesion matu...

ORGANISM(S): Mus musculus (Mouse)

2025-12-29 | PXD062975 | Pride

Vinculin Bio-id Integrins Actin cytoskeleton Erc1 Focal adhesions Paxillin Cyri-b Microtubules

Liprin-α1 and ERC1 control cell edge dynamics by promoting focal adhesion turnover.

Not available

S-EPMC5034239 | biostudies-literature

Biomolecular condensation of ERC1 recruits ATG8 and NBR1 to drive autophagosome formation for plant heat tolerance.

Not available

S-EPMC12646234 | biostudies-literature

Dengue virus NS5 degrades ERC1 during infection to antagonize NF-kB activation.

Not available

S-EPMC10266027 | biostudies-literature