Mouse liver lc-msms

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Proteomics (66)
Metabolomics (7)
Transcriptomics (6)
Other (5)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (49)
Andropogon gerardi (49)
Bacteria (49)
Bartonella quintana JK 31 (49)
Canis lupus familiaris (49)
Cnidaria (49)
Ectopseudomonas oleovorans CECT 5344 (49)
Ensifer adhaerens (49)
Halictus scabiosae (49)
Human immunodeficiency virus 1 (49)
Mesocricetus auratus (49)
Miscanthus x giganteus (49)
Mus musculus (49)
Panicum virgatum (49)
Pseudomonas aeruginosa SJTD-1 (49)
Rabies virus Nishigahara RCEH (49)
Rattus norvegicus (49)
Rattus rattus (49)
Rhodococcus jostii RHA1 (49)
Rhodopseudomonas palustris (49)
Schizosaccharomyces pombe 927 (49)
Shigella (49)
Sorghastrum nutans (49)
Staphylococcus aureus (49)
Streptococcus dysgalactiae subsp. equisimilis SK1249 (49)
Streptococcus pneumoniae (49)
Mus musculus (11)
Homo sapiens (1)
Danio rerio (1)
Oncorhynchus mykiss (1)

Repository

pride (49)
MassIVE (11)
MetaboLights (7)
biostudies-arrayexpress (6)
jPOST (4)
GPMDB (3)
iProX (3)
PanoramaPublic (1)

Tissue

Liver (36)
Hepatocyte (13)
Cell culture (5)
Heart (3)
Kidney (3)
Lung (3)
Skeletal muscle (2)
Spleen (2)
Blood serum (1)
Bone (1)
Bone marrow (1)
Brain (1)
Brown adipose tissue (1)
CD8-positive (1)
Cerebellum (1)
Colon (1)
Duodenum (1)
Epididymal white adipose tissue (1)
Epithelial cell (1)
Jejunum (1)
Lymph node (1)
Macrophage (1)
Mammary gland tumor cell (1)
Neutrophil (1)
Pancreas (1)
Sperm (1)
T cell (1)
Testis (1)
Thigh muscle (1)
Thymus (1)

Disease

Disease free (8)
Not Available (3)
Type 2 diabetes mellitus (3)
Breast cancer (1)
Colon cancer (1)
Male infertility (1)
Myocardial ischemia (1)
Non-alcoholic steatohepatitis (1)
Obesity (1)
Werner syndrome (1)

Technology Type

Mass Spectrometry (49)
Shotgun proteomics (35)
Mass spectrometry (5)
Gel-based experiment (5)
Bottom-up proteomics (4)
Data-independent acquisition (4)
Mass spectrometry assay (3)
Data-dependent acquisition (3)
SWATH MS (3)
Affinity purification coupled with mass spectrometry proteomics (1)
DiaPASEF (1)

Instrument Platform

Orbitrap Fusion (4)
Instrument (3)
Orbitrap Fusion Lumos (3)
Impact II (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
NextSeq 500 (1)
Orbitrap Fusion ETD (1)
Q Exactive (1)
Q Exactive HF (1)
LTQ-FT (Thermo) (1)
Liquid Chromatography MS - alternating - c18 (1)
Wates I-Class/XEVO-G2 XS QTOF (1)
LTQ-FT (1)
Liquid Chromatography MS - positive - reverse-phase (1)

Publication Date

2023 (12)
2022 (12)
2025 (9)
2015 (6)
2021 (5)
2020 (5)
2019 (5)
2026 (5)
2016 (4)
2018 (4)
2024 (3)
2014 (3)
2010 (2)
2012 (1)
2017 (1)

CHEBI ID

CHEBI:80701 (2)
CHEBI:81223 (2)
CHEBI:36238 (2)
CHEBI:17278 (2)
CHEBI:28111 (2)
CHEBI:78759 (2)
CHEBI:80656 (2)
CHEBI:80549 (2)
CHEBI:17899 (2)
CHEBI:7735 (2)
CHEBI:16312 (2)
CHEBI:28697 (2)
CHEBI:34154 (2)
CHEBI:46961 (2)
CHEBI:30805 (2)
CHEBI:63969 (2)
CHEBI:4778 (2)
CHEBI:34406 (2)
CHEBI:16566 (2)
CHEBI:116314 (2)
CHEBI:16393 (2)
CHEBI:20096 (2)
CHEBI:72957 (2)
CHEBI:47828 (2)
CHEBI:36378 (2)
CHEBI:28865 (2)
CHEBI:27432 (2)
CHEBI:135100 (1)
CHEBI:164844 (1)
CHEBI:175212 (1)

Metabolite Name

Mollugin (2)
1,28-Octacosanediol diferulate (2)
Zopiclone (2)
Selenohomocystine (2)
Spergualin (2)
Glycerylphosphorylcholine (2)
Isoamericanol A (2)
Olanzapine (2)
2,6-diamino-4-hydroxy-5-formamidopyrimidine (2)
6-Oxopiperidine-2-carboxylic acid (2)
D-Ornithine (2)
L-quinate (2)
Floionolic acid (2)
Imidazoleacetic acid ribotide (2)
Astin I (2)
LysoPC(18:2(9Z,12Z)/0:0) (2)
LysoPE(18:0/0:0) (2)
Goshuyic acid (2)
N-Acetyl-a-neuraminic acid (2)
2-Keto-6-acetamidocaproate (2)
L-Alanine (2)
Salbutamol (2)
Dalbergin (2)
Levorphanol (2)
Imidazolepropionic acid (2)
5-Methoxyindoleacetate (2)
N-Acetylmuramate (2)
5-Hydroxyindoleacetic acid (2)
Vanillin (2)
L-Threonine (2)

Study type

Transcription profiling by array (4)
ChIP-chip by array (1)
RNA-seq of coding RNA (1)

Release Date

2016 (2)
2010 (2)
2023 (1)
2012 (1)

Lab affiliation

Bioanalytical Mass Spectrometry Research Group, Chemistry Department, Universite du Quebec a Montreal (UQAM), Montreal (Quebec), Canada (5)
Department of Cell Biology, School of Medicine, Johns Hopkins University, Baltimore, MD, USA (2)
Life Sciences of Tsinghua University (2)
Bioanalytical Mass Spectrometry Research Group Chemistry Department, Université du Québec à Montréal (UQÀM) Montréal (Québec) Canada (1)
Cambridge Institute for Medical Research, University of Cambridge, Cambridge Biomedical Campus, CB2 0XY, UK (1)
Center for Inflammation Research, VIB, Ghent, Belgium (1)
Centre de recherche du CHU de Québec, Faculty of Medicine, Université Laval, Quebec City Québec, Canada (1)
Children’s Medical Research Institute, Faculty of Medicine and Health, The University of Sydney, Westmead, NSW 2145, Australia (1)
Cyrus Tang Medical Institute, Soochow University, Suzhou 215123, China. (1)
Department of Biochemistry and Molecular Biology, University of Southern Denmark (1)
Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark (1)
Department of Biology, Institute of Molecular Systems Biology, ETH Zürich, Zürich, Switzerland Department of Science, Faculty of Science, University of Zürich, Zürich, Switzerland (1)
Department of Biomedicine, The University of Bergen, Bergen, Norway (1)
Department of Cell Biology School of Medicine Johns Hopkins University Baltmore, MD USA (1)
Department of Chemistry, Lomonosov Moscow State University, Leninskye Gory 1, 119991 Moscow, Russia (1)
Department of General, Visceral and Transplantation Surgery, University Clinic RWTH Aachen, Aachen, Germany (1)
Department of Health Science and Technology, The Faculty of Medicine, Aalborg University, Denmark (1)
Department of Human Genetics and Biochemistry Sackler School of Medicine Tel Aviv University Tel-Aviv, Israel 69978 (1)
Department of Molecular Biology, Cristea Lab, Princeton University, Princeton, NJ, US (lab head) (1)
Department of Urology & Andrology, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310016, China (1)
Diabetes and Circadian Rhythms Department, Nestlé Institute of Health Sciences, CH-1015 Lausanne, Switzerland (1)
Experiment Center for Teaching and Learning, Shanghai University of Traditional Chinese Medicine, Shanghai 201210, China. (1)
Group leader, Professor Novo Nordisk Foundation Center for Protein Research University of Copenhagen Faculty of Health and Medical Sciences (1)
HIT Center for Life Sciences,Harbin Institute of Technology,China (1)
Institute for Genetics and Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Joseph-Stelzmann-Str. 26 50931 Cologne, Germany (1)
Institute for Genetics and Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Joseph-Stelzmann-Strasse 26, Cologne, Germany (1)
Institute of Cellular Biology and Pathology "N. Simionescu", Proteomics Department, Bucharest, Romania (1)
Institute of Toxicology and Environmental Hygiene, Technical University of Munich, School of Medicine, Munich, Germany Institute of Molecular Toxicology and Pharmacology, Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany (1)
Instituto de Investigaciones Sanitarias de Santiago de Compostela (1)
Juntendo University (1)

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New aspects characterizing nonobese NAFLD by the analysis of the intestinal flora and metabolites using a mouse model

Nonalcoholic fatty liver disease (NAFLD) is a major public health problem due to the high incidence affecting approximately one-third of the world’s population. NAFLD is usually linked to obesity and excessive weight. A subset of patients with NAFLD express normal or low body mass index; thus, th...

2024-02-27 | MTBLS9365 | MetaboLights

Proteomic Analysis of Mouse Liver Microsomes by 2D-LC-MSMS

Liver plays a crucial role in numerous metabolic processes and therefore is the primary target of study in drug discovery and molecular toxicology. Devising an appropriate analytical strategy for an efficient analysis of the liver samples has been a major concern in proteomics. The aim of this study...

ORGANISM(S): Mus musculus (Mouse)

2015-03-26 | PXD000731 | Pride

Proteomic Analysis of Mouse Liver S9 Fraction by 2D-LC-MSMS

ORGANISM(S): Mus musculus (Mouse)

2015-03-26 | PXD000733 | Pride

Mouse liver s9 fraction 2d-lc-msms Tripletof Proteinpilot

Mouse Liver Mannose-6-Phosphate Glycoproteome LC-MSMS

This is the raw data and Byonic search results of mouse liver Mannose-6-Phosphate glycoproteome.

ORGANISM(S): Mus musculus (Mouse)

2020-03-11 | PXD012404 | Pride

Mouse liver mannose-6-phosphate glycoproteome

Quantitative LC-MSMS of mouse lemur liver during early and late winter

Grey mouse lemurs (Microcebus murinus) are a primate species, which exhibits strong physiological seasonality in response to environmental energetic constraint. They notably accumulate large amounts of lipid reserves during early winter, which are thereafter mobilized during late winter, when food a...

ORGANISM(S): Microcebus murinus

2022-05-04 | PXD030198 | Pride

Grey mouse lemur Lc-msms Seasonality Liver

Mice liver tissue LC-MSMS EPAC

We employed mouse models with targeted deletion of the genes encoding Epac1 (Rapgef3) and Epac2 (Rapgef4) in combination with 2/3 partial hepatectomy to investigate the functional roles of Epac1 and Epac2 in liver. Proteomic analysis of liver tissue before and 36h after hepatectomy revealed changes ...

ORGANISM(S): Mus musculus (Mouse)

2019-09-12 | PXD006165 | Pride

Lc-msms Hepatectomy Liver tissue Mice Epac

Eurasian common shrew liver proteome over the seasons LC-MSMS

Eurasian common shrews (Sorex araneus) maintain exceptionally high metabolic rates year-round, posing a significant energetic challenge during winter when food availability declines. To investigate seasonal metabolic regulation, we performed proteomic profiling of liver tissue—central to energy home...

ORGANISM(S): Sorex araneus

2025-10-31 | PXD068559 | Pride

Lc-msms Sorex araneus Timeseries Liver Seasons Hibernation Shrew

Wild-type and Pgrmc1 KO mouse liver membrane LC-MSMS with isobaric tagging

Progesterone receptor membrane component 1 (PGRMC1) is a heme binding protein implicated in a wide range of cellular functions. Our previous studies showed that PGRMC1 binds to cytochromes P450 in yeast and mammalian cells and promotes activity of these enzymes. Recently, the paralog PGRMC2 was show...

ORGANISM(S): Mus musculus (Mouse)

2022-02-16 | PXD028238 | Pride

Lc-msms Mouse Tmt Membrane Pgrmc1 Liver Isobaric tag

Proteomic Analysis of Rat Liver Microsomes by 2D-LC-MSMS

ORGANISM(S): Rattus norvegicus (Rat)

2015-03-26 | PXD000720 | Pride

2d-lc-msms Tripletof Rat liver microsomes Proteinpilot

Proteomic Analysis of Human Liver Microsomes by 2D-LC-MSMS

ORGANISM(S): Homo sapiens (Human)

2015-03-26 | PXD000721 | Pride

2d-lc-msms Tripletof Proteinpilot Human liver microsomes

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84 Results

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