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ProteomicsTMT Multiplexing-Based Quantitative Analysis of Pathogenic Th2 Proteomes.
To investigate the regulation of pathogenic Th2 (pTh2) cells and the role of histone deacetylase 1 (HDAC1) in the respective processes, we used a new in vitro protocol for generating pTh2 cells and performed qunatitative mass spectrometry analysis based on TMTpro 16plex multiplexing to analyze prote...
ORGANISM(S): Mus musculus (Mouse) 
2025-02-20 | PXD042975 | Pride
Tmtpro 16plex Pathogenic th2 cells Mus musculus Th2 cells 
ProteomicsAchieving a 35plex Tandem Mass Tag Reagent Set Through Deuterium Incorporation
Mass spectrometry-based sample multiplexing with isobaric tags permits the development of high-throughput and precise quantitative biological assays with proteome-wide coverage and minimal missing values. Here, we nearly double the multiplexing capability of the TMTpro reagent set to 35-plex through...
ORGANISM(S): Homo sapiens (Human) 
2024-10-17 | PXD054559 | Pride
Abpp Deuterium Isobaric tagging Tmtprod Tmtpro 
UnknownMassively parallel sample preparation for multiplexed single-cell proteomics using nPOP.
Not available
S-EPMC11614709 | biostudies-literature
UnknownIncreasing the throughput of sensitive proteomics by plexDIA.
Not available
S-EPMC9839897 | biostudies-literature
ProteomicsMass spectrometry-based proteomics analysis of human globus pallidus from progressive supranuclear palsy patients discovers multiple disease pathways
Progressive supranuclear palsy (PSP) is a neurodegenerative disorder clinically characterized by progressive postural instability, supranuclear gaze palsy, parkinsonism, and cognitive decline caused by degeneration in specific areas of the brain including globus pallidus (GP), substantia nigra, and ...
ORGANISM(S): Homo sapiens (Human) 
2022-12-08 | PXD031648 | Pride
Globus pallidus Psp Proteomics Progressive supranuclear palsy Mass spectrometry Human brain tissue 
UnknownOptimization of iTRAQ labelling coupled to OFFGEL fractionation as a proteomic workflow to the analysis of microsomal proteins of Medicago truncatula roots.
Not available
S-EPMC3442994 | biostudies-literature
ProteomicsCell-selective multiplexed bioorthogonal noncanonical amino acid tagging for versatile nascent proteome profiling
Cell-selective bioorthogonal noncanonical amino acid tagging (BONCAT) of newly synthesized proteins, catalyzed by engineered aminoacyl-tRNA synthetase (aaRSs), is a powerful technology for time-resolved characterization of the nascent proteome. Currently, cell-selective BONCAT studies in bacteria re...
ORGANISM(S): Klebsiella pneumoniae ATCC 43816 Escherichia coli Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) 
2026-04-11 | PXD067013 | Pride
Chemoproteomics Boncat Nascent proteins 
ProteomicsTMTpro16plex Isobaric Labeling Reagents: Attaining New Sample Multiplexing Heights and New Cellular Proteome Depths in Quantitative Proteomics
Isobaric labeling empowers proteome-wide expression measurements simultaneously across multiple samples. Here, an expanded set of 16 isobaric reagents based on a proline backbone (TMTpro) is presented. These reagents have similar characteristics to existing TMT reagents but with increased fragmentat...
ORGANISM(S): Homo sapiens (Human) 
2020-03-19 | PXD016491 | Pride
Tmtpro16 
ProteomicsTMTpro16plex Isobaric Labeling Reagents: Attaining New Sample Multiplexing Heights and New Cellular Proteome Depths in Quantitative Proteomics
Isobaric labeling empowers proteome-wide expression measurements simultaneously across multiple samples. Here, an expanded set of 16 isobaric reagents based on a proline backbone (TMTpro) is presented. These reagents have similar characteristics to existing TMT reagents but with increased fragmentat...
ORGANISM(S): Homo sapiens (Human) 
2020-03-19 | PXD016940 | Pride
Human Tmtpro Proteomics Sps-ms3 Cell lines 
ProteomicsTMTpro16plex Isobaric Labeling Reagents: Attaining New Sample Multiplexing Heights and New Cellular Proteome Depths in Quantitative Proteomics
Isobaric labeling empowers proteome-wide expression measurements simultaneously across multiple samples. Here, an expanded set of 16 isobaric reagents based on a proline backbone (TMTpro) is presented. These reagents have similar characteristics to existing TMT reagents but with increased fragmentat...
ORGANISM(S): Homo sapiens (Human) 
2020-03-19 | PXD014369 | Pride
Tmtpro16plex Real-time search Quantitative proteomics 
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