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TranscriptomicsTime-series of transcriptome analysis of Bacillus subtilis response to 25 mM potassium acetate and 0.85 M-BM-5M CCCP
The advent of M-bM-^@M-^XomicsM-bM-^@M-^Y techniques bear significant potential for the assessment of the microbiological stability of foods. This requires the integration of molecular data with their implication for cellular physiology. Here we performed a comparative physiological and transcriptio...
ORGANISM(S): Bacillus subtilis 
2014-04-11 | E-GEOD-55051 | biostudies-arrayexpress
TranscriptomicsTranscriptional analyses of the ectomycorrhizal (ECM) fungus Paxillus involutus during growth on various lignocellulose soil substrates
In this study, examinations were performed on how the ECM fungus Paxillus involutus degrade complex, plant and litter material by using elemental analyses, FTIR spectroscopy, pyrolysis-GC/MS, and synchronous fluorescence spectroscopy together with microarray analyses screening 12,214 gene models, de...
ORGANISM(S): Paxillus involutus Paxillus involutus ATCC 200175 
2012-02-01 | GSE34402 | GEO
UnknownINTELLANCE 2/EORTC 1410 randomized phase II study of Depatux-M alone and with temozolomide vs temozolomide or lomustine in recurrent EGFR amplified glioblastoma.
Not available
S-EPMC7229258 | biostudies-literature
TranscriptomicsChromatin immunoprecipitation of Rok-myc and Hbs-myc in Bacillus subtilis
The Rok protein of Bacillus subtilis was identified as a negative regulator of competence development. Here we show that Rok binds to extended areas of the B. subtilis genome that are characterized by a high A+T content and are known or believed to have been acquired by horizontal gene transfer, e.g...
ORGANISM(S): Bacillus subtilis subsp. subtilis str. 168 
2011-01-01 | E-GEOD-23199 | biostudies-arrayexpress
TranscriptomicsTranscriptional analyses of the ectomycorrhizal (ECM) fungus Paxillus involutus during growth on various lignocellulose soil substrates
In this study, examinations were performed on how the ECM fungus Paxillus involutus degrade complex, plant and litter material by using elemental analyses, FTIR spectroscopy, pyrolysis-GC/MS, and synchronous fluorescence spectroscopy together with microarray analyses screening 12,214 gene models, de...
ORGANISM(S): Paxillus involutus 
2012-02-01 | E-GEOD-34402 | biostudies-arrayexpress
UnknownCalicivirus from novel Recovirus genogroup in human diarrhea, Bangladesh.
Not available
S-EPMC3376821 | biostudies-literature
ProteomicsQuantitative dissection and stoichiometry determination of the human SET1/MLL histone methyltransferase complexes
Methylation of lysine 4 at histone H3 (H3K4) at promoters is tightly linked to transcriptional regulation in human cells. At least six different COMPASS-like multi-subunit (SET1/MLL) complexes have been described that contain methyltransferase activity towards H3K4, but a comprehensive and quantitat...
ORGANISM(S): Homo sapiens (Human) 
2013-09-13 | PXD000172 | Pride
Mll Set1 Ms Compass Histone methylation Human 
ProteomicsDynamic readers for 5-(hydroxy)methylcytosine and its oxidized derivatives
Tet proteins oxidize 5-methylcytosine (mC) to generate 5-hydroxymethyl (hmC), 5-formyl (fC) and 5-carboxylcytosine (caC). The exact function of these oxidative cytosine bases remains elusive. We applied quantitative mass spectrometry-based proteomics to identify readers for mC and hmC in mouse embry...
ORGANISM(S): Mus musculus (Mouse) 
2013-02-26 | PXD000143 | Pride
5-hydroxymethylcytosine Differentiation Stem cells Chromatin readers Quantitative mass spectrometry 
TranscriptomicsAlteration of gene expression in mammary gland tissue of dairy cows in response to dietary unsaturated fatty acids
The aim of this study was to determine the effects of unprotected dietary unsaturated fatty acids (UFA) from different plant oils on gene expression in the mammary gland of grazing dairy cows. Milk composition and gene expression in the mammary gland tissue were evaluated in grazing dairy cows suppl...
ORGANISM(S): Bos taurus 
2011-02-01 | GSE20909 | GEO
UnknownExploring target-specific primer extension in combination with a bead-based suspension array for multiplexed detection and typing using Streptococcus suis as a model pathogen.
Not available
S-EPMC5753849 | biostudies-literature
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