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ProteomicsModelling glycan processing reveals Golgi-enzyme homeostasis upon trafficking defects and cellular differentiation
Description: These date form the basis for supplementary table 2 and supplementary figure 6 of the manuscript "Modelling glycan processing reveals Golgi-enzyme homeostasis upon trafficking defects and cellular differentiation" by P Fisher, H Spencer, J Thomas-Oates, AJ Wood, D Ungar in Cell Reports
ORGANISM(S): Homo sapiens (Human) 
2019-11-11 | PXD013211 | Pride
Mscs Glycan processing Markov chain monte carlo Mass spectrometry Cog complex Golgi apparatus 
UnknownSolving Max-Cut Problem Using Spiking Boltzmann Machine Based on Neuromorphic Hardware with Phase Change Memory.
Not available
S-EPMC11633485 | biostudies-literature
TranscriptomicsTranscription profiling of Rpp2-resistant (PI230970) and susceptible (Embrapa-48) soybean cultivars to soybean rust from infection to symptom development
Expression profiling in Rpp2-resistant (PI230970) and susceptible (Embrapa-48) plant lines to soybean rust from infection to symptom development
ORGANISM(S): Glycine max 
2008-02-28 | E-TABM-230 | biostudies-arrayexpress
UnknownThe ability of post-chemoradiotherapy DWI ADCmean and 18F-FDG SUVmax to predict treatment outcomes in head and neck cancer: impact of human papilloma virus oropharyngeal cancer status.
Not available
S-EPMC8236463 | biostudies-literature
UnknownNegatively Charged Yellow-Emitting 1-Aminopyrene Dyes for Reductive Amination and Fluorescence Detection of Glycans.
Not available
S-EPMC7154675 | biostudies-literature
ProteomicsPHB1 and PHB2 deletion cell proteome
Folding of newly synthesized proteins poses challenges for a functional proteome. Dedicated protein quality control (PQC) systems promote either the folding of nascent polypeptides at ribosomes or, if this fails, ensure their degradation. While well studied for cytosolic protein biogenesis, it is no...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2023-08-14 | PXD043668 | Pride
Phb2 Yeast Label-free Phb1 Lc-ms/ms 
UnknownAutophagy balances mtDNA synthesis and degradation by DNA polymerase POLG during starvation.
Not available
S-EPMC5940314 | biostudies-literature
ProteomicsCardiomyocyte Contractile Impairment in Heart Failure Results from Reduced BAG3-mediated Sarcomeric Protein Turnover
The association between reduced myofilament force-generating capacity (Fmax) and heart failure (HF) is clear, however the underlying molecular mechanisms are poorly understood. Here, we show impaired Fmax arises from reduced BAG3-mediated sarcomere turnover. Myofilament BAG3 expression decreases in ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090) 
2020-11-06 | MSV000086422 | MassIVE
TranscriptomicsTranscription profiling of Arabidopsis to identify Tween 20 inducible genes
Polyethylene glycol sorbitan monoacylates (Tween) are detergents of widespread use in plant sciences. We show them, notably Tween 20, to cause a rapid and complex change in transcript abundance which bears all characteristics of a PAMP / elicitor-induced defense response, and they do so at concentra...
ORGANISM(S): Arabidopsis thaliana 
2009-11-10 | E-GEOD-5513 | biostudies-arrayexpress
ProteomicsMulti-facetted proteomics of mitochondrial TMBIM5 deficient cell lines: Regulation of mitochondrial proteostasis by the proton gradient
Mitochondria adapt to different energetic demands reshaping their proteome. Mitochondrial proteases are emerging as key regulators of these adaptive processes. Here, we use a multi-proteomic approach to demonstrate regulation of the m-AAA protease AFG3L2 by the mitochondrial proton gradient, couplin...
ORGANISM(S): Homo sapiens (Human) 
2022-07-26 | PXD030095 | Pride
Cyclohexamide Hek Mitochondria Ghitm Hela Silac Afg3l2 Tmbim5 
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