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ProteomicsUltrafast and Reproducible Proteomics from Small amounts of Heart Tissue Enabled by Azo and timsTOF Pro
Data for the manuscript "Ultrafast and Reproducible Proteomics from Small amounts of Heart Tissue Enabled by Azo and timsTOF Pro".
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2021-05-21 | MSV000087476 | MassIVE
ProteomicsPASEF technology on timsTOF Pro improves quality of FPOP analysis
Fast photochemical oxidation of proteins (FPOP) is a modern technique for studying protein folding, conformations, interactions, etc. In this work, timsTOF Pro mass spectrometer coupled with trapped ion mobility spectrometry was used for identification of oxidative modifications in a model protein. ...
ORGANISM(S): Homo sapiens (Human) 
2021-06-10 | PXD020509 | Pride
Tims Pasef Timstof Protein footprinting Hydroxyl radical Fpop 
ProteomicsLC-MS/MS interactomics analysis of Praf2 with timsTOF Pro
LC-MS/MS interactomics analysis of Praf2 using TurboID with timsTOF Pro.
ORGANISM(S): Homo sapiens (Human) 
2023-12-20 | PXD029019 | Pride
Turboid Interactomics Praf2 Timstof pro Lc-ms/ms 
ProteomicsProteomics Tool Spike-in dataset analyzed on a timsTOF Pro
Label-free proteomics enables the unbiased quantification of thousands of proteins across large sample cohorts. Commonly used mass spectrometry-based proteomic workflows rely on data dependent acquisition (DDA). However, its stochastic selection of peptide features for fragmentation-based identifica...
ORGANISM(S): Homo sapiens (Human) Escherichia coli 
2021-07-10 | PXD021425 | Pride
Timstof pro Ion mobility spectrometry 
ProteomicsOxonium Ion-Guided Ion Mobility-Assisted Glycoproteomics on the timsTOF Pro
Spatial separation of ions in the gas-phase, providing information about their size as collisional cross-sections, can readily be achieved through ion mobility. The timsTOF Pro combines a trapped ion mobility device with a quadrupole, collision cell and a time-of-flight analyser to enable the analys...
ORGANISM(S): Homo sapiens (Human) 
2023-01-17 | PXD034845 | Pride
Tims N-glycopeptides Oxonium ions Plasma Neutrophils Ion mobility 
ProteomicsE.coli Dilution mixed with standard HeLa measured in DIA and DDA mode with timsTOF
E.coli Dilution were performed and mixed with standard HeLa in 1:1, 1:2, 1:4, 1:5 and 1:10 HeLa. These samples were measured both in DIA and DDA mode using timsTOF-pro-2 instrument. .
ORGANISM(S): Homo sapiens (Human) Escherichia coli 
2026-04-13 | PXD072581 | Pride
ProteomicsProteomic Analysis of Human Conjunctival Cells and Tears Collected with Schirmer Strips Using TimsTOF Pro
This study aimed to investigate the human tear proteins extracted from whole (W) Schirmer strips (ScS) and their two parts, the bulb (B) and the rest of the strip (R) with a comprehensive proteomic approach using a trapped ion mobility mass spectrometer, the timsTOF Pro. Eight ScS were collected fro...
ORGANISM(S): Homo sapiens (Human) 
2022-01-27 | PXD030334 | Pride
Proteomics Conjunctival cells Schirmer strips Tears Timstof pro 
UnknownProteomic Analysis of Tears and Conjunctival Cells Collected with Schirmer Strips Using timsTOF Pro: Preanalytical Considerations.
Not available
S-EPMC8778087 | biostudies-literature
ProteomicsCross-linking/Mass Spectrometry Combined with Ion Mobility on a timsTOF Pro Instrument for Structural Proteomics
The combination of cross-linking/mass spectrometry (XL-MS) and ion mobility is still underexplored for conducting protein conformational and protein-protein interaction studies. We present a method for analyzing cross-linking mixtures on a timsTOF Pro mass spectrometer that allows separating ions ba...
ORGANISM(S): Bos taurus (Bovine) Homo sapiens (Human) Escherichia coli 
2022-03-17 | PXD027234 | Pride
Ion mobility Mass spectrometry Chemical cross-linking Protein 3d-structure Protein interaction networks 
UnknownOxonium Ion-Guided Optimization of Ion Mobility-Assisted Glycoproteomics on the timsTOF Pro.
Not available
S-EPMC9853368 | biostudies-literature
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