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ProteomicsIdentification of ETV6 bound protein by affinity purification of ETV6-HA fusion protein in REH cells
To determine the protein partners of ETV6, we expressed ETV6 and HA-tagged ETV6 in Reh pre-B leukemic cells. Anti-HA magnetic beads were used for affinity purification of ETV6-HA (and ETV6 control) from the nuclear and cytoplasmic fraction. Following purification on-beads digest and LC-MS/MS experim...
ORGANISM(S): Homo sapiens (Human) 
2022-01-26 | PXD031001 | Pride
Leukemia All Etv6 
UnknownEvaluation of the feasibility and impacts of in situ simulation in emergency medicine-a mixed-method study protocol.
Not available
S-EPMC7934732 | biostudies-literature
TranscriptomicsAsthma II
Bronchial Epithelial Cells were isolated processed as described (Chu et al., 2002 and Zhao et al., 2011). The objective of the study was to identify differentially expressed genes between normal control (NC), mild-moderate asmathic (notSA) and severe asthmatic (SA) patients. For demographics data,...
ORGANISM(S): Homo sapiens 
2014-11-14 | E-GEOD-63142 | biostudies-arrayexpress
ProteomicsTERRA interactome in human ALT cancer cells identified by iDRiP-MS method
Alternative Lengthening of Telomeres (ALT) cancer cells are a subset of cancers that depend on the homologous recombination mechanism to extend their telomere length independent of telomerase. ALT cells contain elevated levels of the telomeric-repeat containing long noncoding RNA (TERRA), which is a...
ORGANISM(S): Homo sapiens (Human) 
2022-09-28 | PXD028882 | Pride
Human Lc-msms Alt U2os Terra Lncrna Idrip-ms 
ProteomicsDeciphering Black Extrinsic Tooth Stains composition in Children using metaproteomics
The present study focuses on the use of a metaproteomic approach to analyse Black Extrinsic Tooth Stains, a specific type of pigmented extrinsic substance, in a cohort of 96 Children. Metaproteomics is a powerful emerging technology that successfully enabled human protein and bacterial identificatio...
ORGANISM(S): Homo sapiens (Human) 
2024-07-25 | PXD029245 | Pride
Saliva Dental plaque Oral pathology Metaproteomics 
ProteomicsThe role of Xist-mediated Polycomb recruitment in the initiation of X-chromosome inactivation
The role of Xist-mediated Polycomb recruitment in the initiation of X-chromosome inactivation
ORGANISM(S): Mus musculus (Mouse) 
2019-08-29 | PXD014287 | Pride
Mouse Xist Chirp-ms 
UnknownIsolation and Characterization of Polymorphic Microsatellite Loci for Caridina cantonensis and Transferability Across Eight Confamilial Species (Atyidae, Decapoda).
Not available
S-EPMC6517762 | biostudies-literature
TranscriptomicsAmplification of RANK- and c-Met-mediated signaling promotes metastatic colonization
We found that RANKL, expressed by cancer cells or derived from exogenous sources, consistently induced human prostate, breast, kidney, lung and liver cancer cells to colonize or metastasize to bone in an animal model of cancer bone metastasis. RANK-mediated signaling established a premetastatic nich...
ORGANISM(S): Homo sapiens 
2014-02-06 | E-GEOD-48432 | biostudies-arrayexpress
ProteomicsInherited mitochondrial dysfunction impacts corneal innervation fibre identity, fonctionnality and regenerative potential
The cornea is the transparent tissue covering the anterior part of the eye. Its main roles are to convey the light toward the retina, and to act as a protective barrier against infection or injury for the eye. The transparency of the cornea is a crucial component of its functionality and is the resu...
ORGANISM(S): Mus musculus (Mouse) 
2024-07-25 | PXD052337 | Pride
Epithelium Mitochondria Transcriptomic Opa1 Innervation Proteomic Cornea Tear film 
TranscriptomicsTranscription profiling of human lymphoblastoid cell response to ultaviolet and ionising radiation
Peripheral blood lymphocytes from a total of 15 healthy individuals without history of cancer (NoCa) were immortalized with Epstein-Barr virus.

Cells were exposed to mock treatment (Mock), ultra-violet radiation (UV), or ionizing radiation (IR). For UV radiation treatment, cells were exposed...
ORGANISM(S): Homo sapiens 
2007-09-05 | E-GEOD-1977 | biostudies-arrayexpress
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