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ProteomicsRickettsia slovaca intra cellular bacteria global proteome
Semi quantitative intracellular bacteria proteome using a 2D nanoLC-M/MS analysis system enabling a maximum sample exploration. This setup was helpful to analyse this complex sample composed of peptides from the studied bacteria and its host. Sample was doped before injection in order to calculate p...
ORGANISM(S): Rickettsia slovaca (strain 13-B) 
2018-10-25 | PXD003195 | Pride
Hdmse Xenopus laevis Rickettsia Hi3 
ProteomicsRickettsia raoultii intra cellular bacteria global proteome
Semi quantitative intracellular bacteria proteome using a 2D nanoLC-M/MS analysis system enabling a maximum sample exploration. This setup was helpful to analyse this complex sample composed of peptides from the studied bacteria and its host. Sample was doped before injection in order to calculate p...
ORGANISM(S): Rickettsia raoultii Xenopus laevis (African clawed frog) 
2018-10-25 | PXD003193 | Pride
Hdmse Xenopus laevis Rickettsia Hi3 
ProteomicsRickettsia conorii intra cellular bacteria global proteome
Semi quantitative intracellular bacteria proteome using a 2D nanoLC-M/MS analysis system enabling a maximum sample exploration. This setup was helpful to analyse this complex sample composed of peptides from the studied bacteria and its host. Sample was doped before injection in order to calculate p...
ORGANISM(S): Rickettsia conorii (strain ATCC VR-613 / Malish 7) 
2018-10-25 | PXD003194 | Pride
Hdmse Xenopus laevis Rickettsia Hi3 
ProteomicsRickettsia massiliae intra cellular bacteria global proteome
Semi quantitative intracellular bacteria proteome using a 2D nanoLC-M/MS analysis system enabling a maximum sample exploration. This setup was helpful to analyse this complex sample composed of peptides from the studied bacteria and its host. Sample was doped before injection in order to calculate p...
ORGANISM(S): Rickettsia massiliae (strain Mtu5) Xenopus laevis (African clawed frog) 
2018-10-25 | PXD003197 | Pride
Hdmse Xenopus laevis Rickettsia Hi3 
ProteomicsElucidating the Linezolid response of Staphylococcus aureus USA300 (Hi3 quantification)
The translation inhibitor Linezolid is an important antibiotic of last resort against multiresistant gram-positive pathogens including MRSA. Linezolid is reported to specifically inhibit extracellular virulence factors, but the molecular cause is unknown. To elucidate the physiological response of S...
ORGANISM(S): Staphylococcus aureus 
2016-03-18 | PXD001659 | Pride
Linezolid Absolute quantification 
ProteomicsMass spectrometry based quantitative proteome analyses for the import mutants ppi2 and tic56-1 as well as for spectinomycin treated Arabidopsis thalian plants
We acquired quantitative proteomics data from eight week old ppi2 and tic56-1 mutants as well as from wild type treated with 60 µg/ml spectinomycin and related them to their respective wildtype reference. Protein identification and quantification was performed by data-independent MSE acquisition on ...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2016-12-14 | PXD004125 | Pride
Hdmse Tic56-1 Plastid Spectinomycin Plastidic translation Quantitative mass spectrometry Shotgun proteomics Toc-tic-import machinery Hi3 quantification Ppi2 
ProteomicsStoichiometry of two plant glycine decarboxylase complexes and comparison with a cyanobacterial glycine cleavage system
The multienzyme glycine cleavage system (GCS) converts glycine and tetrahydrofolate to the one-carbon compound 5,10-methylenetetrahydrofolate, which is of vital importance for most if not all organisms. Photorespiring plant mitochondria contain very high levels of GCS proteins organized as a fragile...
ORGANISM(S): Pisum sativum (Garden pea) Arabidopsis thaliana (Mouse-ear cress) 
2020-04-23 | PXD018211 | Pride
Arabidopsis Pea Quantification Stoichiometry Qconcat Glycine decarboxylase complex 
ProteomicsComprehensive Absolute Quantification of the Cytosolic Proteome of Bacillus subtilis by Data Independent, Parallel Fragmentation in Liquid Chromatography/Mass Spectrometry (LC/MS)
Absolute protein quantification for cytosolic proteins of B. subtilis growing on a carbon source (condition S) or on an amino acid source (condition CH). Data for 3 biological replicates and 3 technical replicates each for each condition are provided. For data processing and protein identification, ...
ORGANISM(S): Bacillus subtilis subsp. subtilis str. 168 
2014-08-04 | PXD000154 | Pride
Absolute protein quantification Mse Synapt (waters) Dia B. subtilis 
UnknownLabel-free nanoUPLC-MSE based quantification of antimicrobial peptides from the leaf apoplast of Nicotiana attenuata.
Not available
S-EPMC4318441 | biostudies-literature
UnknownComparative Evaluation of Chemical and Photolytic Denitrosation Methods for Chemiluminescence Detection of Total N-Nitrosamines in Wastewater Samples.
Not available
S-EPMC10193580 | biostudies-literature
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