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ProteomicsBubalus bubalis seminal plasma
The domestic buffalo (Bubalus bubalis) has presented an important role in the livestock industry, contributing to milk and meat production worldwide, especially in developing countries. However, little is known about its reproductive particularities. Studies regarding protein composition of buffalo ...
ORGANISM(S): Bubalus bubalis 
2018-06-25 | PXD003728 | Pride
Seminal plasma Bubalus bubalis Buffaloes Label free shotgun lc msms 
ProteomicsProteome profile of Perkinsus marinus
Perkinsus marinus is an intracellular parasitic protozoan that is responsible for serious disease epizootics in marine bivalve molluscs worldwide and along with P. olseni belongs to the OIE list of notified diseases. Despite all available information on P. marinus genomics, more baseline data is req...
ORGANISM(S): Perkinsus marinus 
2018-01-08 | PXD003727 | Pride
In vitro culture Virulence Crassostrea rhizophorae Perkinsus marinus Label-free shotgun hdms 
ProteomicsBenchmarking label-free quantification based on data-independent acquisition (DIA) workflows
Label-free quantification based on data-independent acquisition (DIA) workflows is increasingly popular. Several software tools have been recently published or are commercially available. The present study focuses on the critical evaluation of three different software packages (Progenesis, synapter ...
ORGANISM(S): Homo sapiens (Human) Escherichia coli Saccharomyces cerevisiae (Baker's yeast) 
2017-04-06 | PXD001240 | Pride
Human Yeast E.coli 
ProteomicsEffects of pro-opiomelanocortin neuropeptides on immunological pathways mediated by the melanocortin 3 receptor revealed by label-free quantitative thermal proteome profiling
In a thermal proteome profiling experiment we have identified 300 unique proteins that become thermally stabilized or destabilized downstream of signal activation of the melanocortin 3 receptor (MC3R) when expressed in HEK293 cells. Upon stimulation with either one of the endogenous MC3R-agonists AC...
ORGANISM(S): Homo sapiens (Human) 
2023-10-24 | PXD039945 | Pride
Mc3r Tpp Label-free quantitation Pomc 
ProteomicsDiscovery of potential early colorectal cancer biomarker
Differential analysis of proteomes originated from early lesion of colorectal cancer and colon control tissue using FFPE-FASPTM and Label free analysis using 2DnanoUPLC separation before analysis on a qTOF synapt HDMS G2 using ion mobility as supplementary separation dimension
ORGANISM(S): Homo sapiens (Human) 
2017-03-28 | PXD005735 | Pride
Pt2nm Early stage Ffpe-fasp Human colorectal cancer Pt1nm Label free 
ProteomicsStreptococcus agalactiae Panproteome
Streptococcus agalactiae (Lancefield’s group B Streptococcus, GBS) is a major bacterial species of genus Streptococcus and has medical and veterinary importance by affecting mainly humans (Maione et al., 2005; Johri et al., 2006), cattle (Keefe, 1997) and fish (Mian et al., 2009). The GBS is the mos...
ORGANISM(S): Streptococcus agalactiae 
2019-01-14 | PXD008744 | Pride
Panproteome Sa95 Sa16 Sa20 Sa53 Gbs Sa81 
ProteomicsAnalysis of plasma proteome of pregnant women with polycystic ovary syndrome (PCOS
Polycystic ovary syndrome (PCOS) is the most common endocrinological disorder of fertile-aged women. PCOS has been associated with adverse pregnancy outcomes and abnormalities of the placenta. By taking a quantitative label-free quantitative proteomics approach we set out to investigate if changes i...
ORGANISM(S): Homo sapiens (Human) 
2019-11-25 | PXD012034 | Pride
Mse Pcos Udmse Proteomics Pregnant 
ProteomicsBovine Longissimus thoracis muscle HDMSE with differents ultimate pH
The purpose of this research was to investigate the causes and consequences of pHu variations in beef cattle. For that, were evaluated 176 Nellore beef cattle, and classified into two different pHu groups: High (≥6.0, N=17) and Normal (<5.8, N=159). Plasma concentrations of cortisol and adrenocortic...
ORGANISM(S): Bos indicus 
2018-07-11 | PXD009320 | Pride
Bovine Hdmse Ultimate ph Muscle 
ProteomicsNetwork analyses and data integration of proteomics and metabolomics from leaves of two contrasting varieties of sugarcane in response to drought
Uncovering the molecular mechanisms involved in the responses of crops to drought is crucial to understand and enhance drought tolerance mechanisms. Sugarcane (Saccharum spp.) is an important commercial crop cultivated mainly in tropical and subtropical areas for sucrose and ethanol production. Usua...
ORGANISM(S): Saccharum sp. 
2020-01-02 | PXD014920 | Pride
Canonical correlation analysis Label-free quantitative proteomics Metabolomics Drought 
ProteomicsIdentification of differentially regulated proteins of Caenorhabditis elegans during Salmonella enterica Serovar Typhi exposure using Mass Spectrometry
Recently, proteomics based studies have become the primary contributors for the understanding of host-pathogen interactions and discovery of various drug targets. Herewith, we have used the popular eukaryotic model organism Caenorhabditis elegans to study the host pathogen interactions at protein le...
ORGANISM(S): Caenorhabditis elegans 
2020-05-12 | PXD018392 | Pride
Lc-ms/ms Tca cycle and qpcr Protein-protein interactions Gene ontology 
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