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ProteomicsPlasmodiophora brassicae-triggered cell enlargement and loss of cellular integrity in root systems is mediated by pectin demethylation.
Gall formation on the belowground parts of plants infected with Plasmodiophora brassicae is the result of extensive host cellular reprogramming. The development of these structures is a consequence of increased cell proliferation followed by massive enlargement of cells colonised with the pathogen. ...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2021-07-20 | PXD026660 | Pride
2d gel Gall Cell wall 
ProteomicsProtein expression in TKI-resistant RCC cells.
Resistance to tyrosine kinase inhibitors is an essential issue concerning targeted therapy in renal cancer. This research focuses on molecular background of resistance to axitinib and sorafenib observed from the very beginning of a standard two-dimensional cell culture in monolayer as well as in thr...
ORGANISM(S): Homo sapiens (Human) 
2018-01-02 | PXD002600 | Pride
Kidney cancer Stem cell Mass spectrometry Label free 
ProteomicsPalm oil-rich diet affects murine liver proteome and S-palmitoylome
Palmitic acid (C16:0) is the most abundant saturated fatty acid in animals serving as a substrate in lipid synthesis and β-oxidation, and in the modification of proteins called palmitoylation. The influence of dietary palmitic acid on protein palmitoylation in the context of metabolic processes rema...
ORGANISM(S): Mus musculus (Mouse) 
2021-12-14 | PXD025935 | Pride
S-palmitoylation Neutrophil degranulation Mass spectrometry High-fat diet Palm oil Calfacilitin/tlcd1 
ProteomicsComparative proteomic analysis of eggs and ovarian fluid in Siberian sturgeon: Insights into composition and functional significance
Sturgeon species, considered living fossils, exhibit unique reproductive characteristics, making it crucial to comprehend the molecular processes governing the formation and quality of their eggs. However, there is a notable lack of comprehensive data concerning the protein composition analysis of s...
ORGANISM(S): Acipenser baerii 
2023-12-18 | PXD044168 | Pride
Mass spectrometry Acipenser baerii Ovarian fluid Eggs Proteome 
ProteomicsN-glycosylation acts as a switch for FGFR1 trafficking between the plasma membrane and the nuclear envelope
Fibroblast growth factor receptor 1 (FGFR1) is a heavily N-glycosylated cell surface receptor tyrosine kinase, which in conjunction with fibroblast growth factors (FGFs) transmits signals through the plasma membrane. The balanced FGF/FGFR1 signaling is crucial for the development and homeostasis of ...
ORGANISM(S): Homo sapiens (Human) 
2023-10-24 | PXD042325 | Pride
Fgfr1 Trafficking Glycosylation Label-free Nucleus Signaling 
ProteomicsComparative mass spectrometry reveals a novel TTC33-associated network core (TANC) complex with functions in DNA damage response
TTC33 is a 30 kDa human uncharacterized tetratricopeptide repeat protein. Here, we employed label-free mass spectrometry analysis to identify the proteins interactors. The TTC33-associated network (TAN) is composed of WDR61, PHF5A, which together with TTC33 form a trimeric core complex (TANC), that ...
ORGANISM(S): Homo sapiens (Human) 
2026-07-06 | PXD059336 | Pride
Ttc33 Dna repair Wdr61 Pafc Ung dna glycosylase Skic Phf5a 
ProteomicsComparative mass spectrometry reveals a novel TTC33-associated network core (TANC) complex with functions in DNA damage response
TTC33 is a 30 kDa human uncharacterized tetratricopeptide repeat protein. Here, we employed label-free mass spectrometry analysis to identify the proteins interactors. The TTC33-associated network (TAN) is composed of WDR61, PHF5A, which together with TTC33 form a trimeric core complex (TANC), that ...
ORGANISM(S): Homo sapiens (Human) 
2026-07-06 | PXD059337 | Pride
Ttc33 Dna repair Wdr61 Pafc Ung dna glycosylase Skic Phf5a 
ProteomicsComparative mass spectrometry reveals a novel TTC33-associated network core (TANC) complex with functions in DNA damage response
TTC33 is a 30 kDa human uncharacterized tetratricopeptide repeat protein. Here, we employed label-free mass spectrometry analysis to identify the proteins interactors. The TTC33-associated network (TAN) is composed of WDR61, PHF5A, which together with TTC33 form a trimeric core complex (TANC), that ...
ORGANISM(S): Homo sapiens (Human) 
2026-07-06 | PXD066861 | Pride
Ttc33 Dna repair Wdr61 Pafc Ung dna glycosylase Skic Phf5a 
ProteomicsIdentification of changes in the proteome of isolated lupin embryonic axes cultured in vitro caused by sugar starvation and asparagine
The research was conducted on embryonic axes which were isolated from imbibed seeds (24 h) and next were cultured for 96 h in the dark under in vitro conditions on a liquid mineral Heller medium with the following trophic variants: i) with 60 mM sucrose (+S), ii) without sucrose (-S), iii) with 60 m...
ORGANISM(S): Lupinus albus Lupinus mutabilis 
2023-07-24 | PXD041380 | Pride
Autophagy Embryo Peroxisome Oleophagy Carbon and nitrogen starvation Asparagine Oil body Itraq 
ProteomicsChemerin effect on the endometrial proteome of the domestic pig during implantation obtained by LC-MS/MS analysis
Chemerin (CHEM) is a hormone mainly expressed in adipocytes involved in the regulation of energy homeostasis and inflammatory response. CHEM expression has been demonstrated in the structures of the porcine hypothalamic-pituitary-gonadal axis, as well as in the uterus, trophoblasts and conceptuses o...
ORGANISM(S): Sus scrofa domesticus (domestic pig) 
2022-04-26 | PXD031795 | Pride
Endometrium Tmt Lc-ms Chemerin Pig 
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