Sort   by:  
 Page size 
ProteomicsRNA interactome capture identifies key proteins for herpesviral gene expression
The primary mRNA sequence determines its secondary structure and the repertoire of interacting RNA binding proteins (RBPs). The resulting mRNA ribonucleoprotein complex (mRNP) then influences all stages of the life of an mRNA. Here, we determined the mRNP composition of individual Kaposi Sarcoma Her...
ORGANISM(S): Homo sapiens (Human) Human gammaherpesvirus 8 
2026-01-23 | PXD056253 | Pride
Kshv Au-rich sequences Srsf3 Rna-binding-proteins Rna interactome capture Rna stability Codon optimization Herpesviral gene expression Rbps Lytic transcripts Orf57 
ProteomicsRNA interactome capture in Escherichia coli globally identifies RNA-binding proteins
RNA-binding proteins (RPBs) are deeply involved in many fundamental cellular processes in bacteria and are vital for their survival. Despite this, few studies have so far been dedicated to globally identifying bacterial RBPs. We have adapted the RNA interactome capture (RIC) technique, originally de...
ORGANISM(S): Escherichia coli 
2023-03-30 | PXD032939 | Pride
Lc-ms Rna interactome capture Escherichia coli 
ProteomicsSerial interactome capture of the human cell nucleus
Novel RNA-guided cellular functions are paralleled by an increasing number of RNA binding proteins (RBPs). We present “serial interactome capture” (serIC), a multiple purification procedure of UV-crosslinked poly(A)-RNA-protein complexes that enables global RBP detection with maximal specificity. We...
ORGANISM(S): Homo sapiens (Human) 
2016-03-31 | PXD003664 | Pride
Rna binding proteins  interactome capture  nuclear rna binding proteome 
ProteomicsProteome-wide quantitative RNA interactome capture (qRIC) identifies phosphorylation sites with regulatory potential in RBM20
Cellular mRNA-binding proteins (mRBPs) are major regulators of gene expression at the post-transcriptional level. While many posttranslational modification sites in mRBPs have been identified, little is known about how these modifications regulate mRBP function. Here, we developed quantitative RNA-i...
ORGANISM(S): Homo sapiens (Human) 
2022-09-05 | PXD030352 | Pride
Proteomics Cell signaling Rbm20 Phosphorylation Rna-binding proteins Alternative splicing Rna-interactome capture Cardiomyopathy 
GenomicsRNA interactome capture in E. coli to identify RNA-binding proteins
RNA interactome capture in E. coli to identify RNA-binding proteins
PRJNA899553 | ENA
ProteomicsRNA interactome capture analysis of mouse male germ cells
Mass spectrometry data of RNA interactome capture (RIC) assay for STA-PUT purified mouse primary male germ cells, including spermatogonia (SG), pachytene spermatocyte (pSC) and round spermatid (rST)
ORGANISM(S): Mus musculus (Mouse) 
2025-10-29 | PXD043074 | Pride
Spermatogonia  pachytene spermatocyte  round spermatid  mouse  rna-interactome capture  proteomics 
UnknownRNA interactome capture in yeast.
Not available
S-EPMC5421583 | biostudies-literature
GenomicsRNA interactome capture identifies key proteins for herpesviral gene expression
RNA interactome capture identifies key proteins for herpesviral gene expression
PRJNA1065267 | ENA
ProteomicsSerial interactome capture of the human cell nucleus
Novel RNA-guided cellular functions are paralleled by an increasing number of RNA binding proteins (RBPs). We present “serial interactome capture” (serIC), a multiple purification procedure of UV-crosslinked poly(A)-RNA-protein complexes that enables global RBP detection with maximal specificity. We...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-10-21 | MSV000080265 | MassIVE
ProteomicsRNA-interactome capture in human embryonic stem cells (hESCs)
Embryonic stem cell (ESC) self-renewal and cell-fate decisions are driven by a broad array of molecular signals. While transcriptional regulators have been extensively studied in human ESCs (hESCs), the extent to which RNA-binding proteins (RBPs) contribute to human pluripotency remains unclear. Her...
ORGANISM(S): Homo sapiens (Human) 
2023-05-05 | PXD025194 | Pride
Rna-interactome capture Ric Hescs Rna-binding proeins Rbps Human embryonic stem cells 
Sort   by:  
 Page size