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MetabolomicsTranscriptome and metabolome changes in Chinese cedar during cold acclimation reveal the roles of flavonoids in needle discoloration and cold resistance

Cryptomeria fortunei growth and development are usually affected by low temperatures. Despite the evergreen nature of this species, most needles turn yellowish-brown in cold winters. The underlying discoloration mechanisms that cause this phenomenon in response to cold acclimation remain...

2022-08-12 | MTBLS3184 | MetaboLights
MetabolomicsIntegrated Four Comparative-Omics Reveals the Mechanism of the Terpenoid Biosynthesis in Two Different Overwintering Cryptomeria fortunei Phenotypes
Chinese cedar (Cryptomeria fortunei) is a tree species with important ornamental, medicinal, and economic value. Terpenoids extracted from the essential oil of C. fortunei needles have been considered valuable ingredients in the pharmaceutical and cosmetic industries. However, the poss...
2022-08-12 | MTBLS3183 | MetaboLights
ProteomicsProteomic profiles of Rat Pancreatic Islets
In this study, we achieved integrated transcriptomic and proteomic profiles of GK islets in a time-course fashion at different stages of T2D. Subsequent bioinformatics analysis revealed the chronological order of T2D-related molecular events during the deterioration of pancreatic islets. Our large q...
ORGANISM(S): Rattus norvegicus (Rat) 
2017-06-02 | PXD004709 | Pride
Rat islets proteome 
UnknownAltered Cellular White Matter But Not Extracellular Free Water on Diffusion MRI in Individuals at Clinical High Risk for Psychosis.
Not available
S-EPMC7142275 | biostudies-literature
ProteomicsProteomic profiles of INS1 cells
In this study, we obtained proteomic profiles of INS1 cells with lipotoxicity and glucolipotoxicity in a time-course fashion.
ORGANISM(S): Rattus rattus (Black rat) 
2018-08-14 | PXD008154 | Pride
Ins1 lipotoxicity glucolipotoxicity 
ProteomicsDIA quantitative protein mass spectrometry of RBE cells knockout NAT10
To further explore the role of NAT10 in ICC, we constructed stable NAT10-knockdown RBE cells using shRNA and performed DIA quantitative proteomic analysis to explore its influence on downstream protein fuction.
ORGANISM(S): Homo sapiens (Human) 
2026-05-25 | PXD058708 | Pride
Intrahepatic cholangiocarcinoma nat10 dia 
ProteomicsHuman CDK Family - Proteomic Analysis of the Human CDK Family Reveals a Novel CDK5 Complex Involved in Cell Growth and Migration
Cyclin-dependent kinases (Cdks) are the catalytic subunits of a family of mammalian heterodimeric serine/threonine kinases that play critical roles in control of cell-cycle progression, transcription and neuronal functions. To systematically investigate the regulations and functions of CDKs, we cond...
ORGANISM(S): Homo sapiens (Human) 
2014-08-08 | PXD000593 | Pride
Human Lc-msms Cdk 
ProteomicsHuman Transcription Factors LC-MSMS
How transcription factors (TFs), the ultimate targets and executors of cellular signalling pathways, are regulated via protein-protein interactions remains elusive. To systematically investigate the regulations and functions of human transcription factors, we performed proteomics studies of soluble ...
ORGANISM(S): Homo sapiens (Human) 
2015-04-07 | PXD001383 | Pride
Human Lc-msms Transcription factors Hek293t 
ProteomicsAP-MS in CRISPR/Cas9 Utilizing Systems for Mapping Endogenous Protein Complexes
We combined clustered regularly interspaced short palindromic repeats/Cas9-mediated gene knockout technology with affinity purification using antibodies against endogenous proteins followed by mass spectrometry analysis, to sensitively and precisely detect protein-protein interactions in unaltered i...
ORGANISM(S): Homo sapiens (Human) 
2017-03-15 | PXD005107 | Pride
Ap-ms Acumen Nf1 Crispr/cas9 Kras 
ProteomicsHuman WW-domain containing proteins TAP-LC-MSMS
To systematically investigate the regulations and functions of human WW-domain containing proteins, we conducted a proteomic analysis of 26 full-length WW-domain containing proteins and 17 WW-domains only, and identified their associated protein complexes in human HEK293T cells using tandem affinity...
ORGANISM(S): Homo sapiens (Human) 
2019-12-02 | PXD004649 | Pride
Human Lc-msms Ww-domain containing proteins Tap 
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