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ProteomicsAnalysis of botrytis cinerea mycelium proteins
Comparison of Botrytis cinerea wild-type B.05.10 and T4 strains using label-free nUPLC-MSE and 2-DE approaches. B. cinerea strain mycelium were grown in synthetic minimal medium-modified Czapeck-Dox. Protein extracts were obtained from pulverized mycelium using TCA-phenol method. Acquired spectra we...
ORGANISM(S): Botryotinia fuckeliana (strain T4) (Noble rot fungus) (Botrytis cinerea) Botryotinia fuckeliana (strain B05.10) (Noble rot fungus) (Botrytis cinerea) 
2013-05-02 | PXD000165 | Pride
Mse Botrytis cinerea 2de Quantification 
ProteomicsCD209L/L-SIGN N-Glycosylation and N-Glycosylation Site Occupancy
CD209L is a membrane glycoprotein with known glycan-binding properties and it also contains 2 N-glycosylation sequons at sites N92 and N361. Treatment with PNGase F in the presence of H218O, which removes N-linked glycans and isotopically labels the formerly-glycosylated site, confirmed that both un...
ORGANISM(S): Homo sapiens (Human) 
2021-09-09 | PXD021309 | Pride
Human cd209l Dc-sign N-glycosylation 
ProteomicsN-Glycosylation of the Epidermal Growth Factor Receptor (EGFR) Derived from Human Oral Squamous Carcinoma Cells with beta-Catenin/CREB-Binding Protein (CBP) Inhibition
Head and neck squamous cell carcinoma (HNSCC) is the sixth most common malignancy in the world; oral squamous cell carcinomas (OSCC) account for the majority of HNSCC cases. A major driver of OSCC is the epidermal growth factor receptor (EGFR), a receptor tyrosine kinase (RTK) with 12 N-glycosylatio...
ORGANISM(S): Homo sapiens (Human) 
2020-03-26 | PXD017060 | Pride
Human Beta-catenin/cbp inhibition Head and neck cancer Glycoproteomics Hsc-3 Glycopeptide Oral squamous cell carcinoma Oscc Egfr Lc-ms/ms Epidermal growth factor receptor Creb-binding protein Cal27 
ProteomicsCellular Ig sequencing - A systematic approach for peptide characterization of B-cell receptor in chronic lymphocytic leukemia cells
The immune system produces a vast repertoire of immunoglobulins (Ig) in response to the wide number of different antigens to which we are exposed. Thanks to processes such as V(D)J recombination, somatic hypermutation, and antigen selection, the immune system is able of generating the high diversity...
ORGANISM(S): Homo sapiens (Human) 
2017-05-08 | PXD004466 | Pride
Immunoglobulin Nuplc-ms/ms Bcr 
UnknownGlobal Changes in Lipid Profiles of Mouse Cortex, Hippocampus, and Hypothalamus Upon p53 Knockout.
Not available
S-EPMC5098149 | biostudies-literature
ProteomicsVEGFR N-glycosylation
Vascular endothelial growth factor receptor-2 (VEGFR2) is a highly N-glycosylated receptor tyrosine kinase involved in pro-angiogenic signaling in physiological and pathological contexts, including cancer. VEGFR2 post-translational modifications (PTMs) and their roles in receptor function and signal...
ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse) 
2021-09-08 | PXD012629 | Pride
Vegfr2 Rtk N-glycosylation Nlc-ms/ms Mouse Glycopeptides 
ProteomicsProteome profiling of Bacillus subtilis stressed with the antibiotics tetracycline and chelocardin
Chelocardin is an atypical tetracycline and its mechanism of action is discussed controversially in literature. Therefore, we analyzed the bacterial response of Bacillus subtilis to chelocardin and as a control for classical tetracyclines to tetracycline by proteomic profiling. The induced marker pr...
ORGANISM(S): Bacillus subtilis subsp. subtilis str. 168 
2016-03-14 | PXD003439 | Pride
Bacillus subtilis tetracycline chelocardin 2d-page proteomics 
Unknownβ-Catenin/CBP inhibition alters epidermal growth factor receptor fucosylation status in oral squamous cell carcinoma.
Not available
S-EPMC7299767 | biostudies-literature
ProteomicsAltered Domain Structure of the Prion Protein Caused by Cu2+ Binding and Functionally Relevant Mutations: Analysis by Cross‐Linking, MS/MS, and NMR
The endogenous cellular prion protein (PrPC) can misfold into the scrapie isoform (PrPSc) and cause fatal infectious diseases. Despite significant research on the prion protein, both its normal function and whether alterations to that function play a critical role in prion diseases remain unknown. T...
ORGANISM(S): Mus musculus (Mouse) 
2020-06-16 | PXD012427 | Pride
Cross-linking Inter-domain protein interaction Mass spectrometry Prion 
ProteomicsHLA binding of self-peptides is biased towards proteins with specific molecular functions
Human leukocyte antigen (HLA) is highly polymorphic and plays a key role in guiding adaptive immune responses by presenting foreign and self peptides to T cells. Each HLA variant selects a minor fraction of peptides that match a certain motif required for optimal interaction with the peptide-binding...
ORGANISM(S): Homo sapiens (Human) 
2026-05-28 | PXD023284 | Pride
Antigen presetation Peptides Hla Lc-ms/ms 
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