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UnknownGeneration of Peptides for Highly Efficient Proximity Utilizing Site-Specific Biotinylation in Cells.
Not available
S-EPMC8875956 | biostudies-literature
UnknownMultiplex detection of homo- and heterodimerization of g protein-coupled receptors by proximity biotinylation.
Not available
S-EPMC3972117 | biostudies-literature
UnknownComparative Application of BioID and TurboID for Protein-Proximity Biotinylation.
Not available
S-EPMC7290721 | biostudies-literature
ProteomicsDevelopment of a method for quantitative analysis of in vivo interactions of pluripotency transcription factors Sox2, Oct4, Nanog by mass spectrometry
Protein-protein proximity of core pluripotency transcription factors plays an important role during cell reprogramming. Pluripotent embryonic stem (ES) cell identity is controlled by a trio of transcription factors: Sox2, Oct4, and Nanog. These proteins often bind to closely localized genomic sites....
ORGANISM(S): Homo sapiens (Human) 
2020-01-21 | PXD015756 | Pride
Mass spectrometry Oct4 Proximity utilizing biotinylation Transcription factors Sox2 Pluripotency 
ProteomicsIdentifying global and mtCU independent MICU1 interactome utilizing BioID2 based proximity labeling and screening
MICU1 is a Ca2+-binding protein that regulates the mitochondrial Ca2+ uniporter channel (mtCU ) and mitochondrial Ca2+ (mCa2+) uptake. MICU1 knockout mice display perinatal lethality and disorganized mitochondrial architecture. These phenotypes are distinct from other mtCU loss-of-function models an...
ORGANISM(S): Homo sapiens (Human) 
2024-01-26 | PXD028462 | Pride
Bioid2 Mitochondria Calcium Proximity-labelling Mcu Micu1 
UnknownIn Vivo Quantitative Estimation of DNA-Dependent Interaction of Sox2 and Oct4 Using BirA-Catalyzed Site-Specific Biotinylation.
Not available
S-EPMC7022529 | biostudies-literature
ProteomicsMapping of the podocin proximity-dependent proteome reveals novel components of the kidney podocyte foot process.
The unique architecture of glomerular podocytes is integral to kidney filtration. Interdigitating foot processes extend from the podocyte cell body, wrap around fenestrated capillaries, and form specialized junctional complexes termed slit diaphragms to create a molecular sieve. However, the full co...
ORGANISM(S): Mus musculus (Mouse) 
2023-05-17 | PXD042301 | Pride
Aging Ildr2 Fnbp1l Podocytes Bioid proximity labeling Foot process 
ProteomicsMapping of the podocin proximity-dependent proteome reveals novel components of the kidney podocyte foot process.
The unique architecture of glomerular podocytes is integral to kidney filtration. Interdigitating foot processes extend from the podocyte cell body, wrap around fenestrated capillaries, and form specialized junctional complexes termed slit diaphragms to create a molecular sieve. However, the full co...
ORGANISM(S): Mus musculus (Mouse) 
2023-06-23 | PXD042302 | Pride
Aging Ildr2 Fnbp1l Podocytes Bioid proximity labeling Foot process 
UnknownMapping of the podocin proximity-dependent proteome reveals novel components of the kidney podocyte foot process.
Not available
S-EPMC10262054 | biostudies-literature
ProteomicsProximity proteomics on RPE1 stable cell lines with miniTurbo-p62 and ATG5 Knock-down to investigate p62 filaments and calcium-rich p62-enwrapped lipid droplets
The selective autophagy receptor p62/SQSTM1 (from hereon p62) is known to form higher-order filaments in vitro and to undergo liquid-liquid phase separation when mixed with poly-ubiquitin. We determined the full-length cryo-EM structure of p62 and elucidated a structured double helical filament scaf...
ORGANISM(S): Homo sapiens (Human) 
2025-12-08 | PXD066163 | Pride
Human Lc-ms Biotinylation Miniturbo Atg5 kd 
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