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UnknownTitanium biomaterials with complex surfaces induced aberrant peripheral circadian rhythms in bone marrow mesenchymal stromal cells.
Not available
S-EPMC5560683 | biostudies-literature
ProteomicsImpact of exercise on the proteome of human peripheral blood mononuclear cells
This project aimed to characterize the impact of high-intensity interval exercise (HIIE) vs. moderate-intensity continuous exercise (MICE) on immune cell proteomics. In a randomized crossover study with 23 young, recreationally active runners, we isolated peripheral blood mononuclear cells (PBMCs) b...
ORGANISM(S): Homo sapiens (Human) 
2025-01-25 | PXD058573 | Pride
Exercise 
ProteomicsIdentification of chloroplast envelope proteins with critical importance for cold acclimation
Differential proteome analysis allowed to identify envelope proteins critical for cold acclimation and frost tolerance in Arabidopsis thaliana.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2021-12-08 | PXD015794 | Pride
Ntt Shotgun proteomics Envelope Mex1 Chloroplast Proteomics 
ProteomicsProteomics and constraint-based modelling reveal enzyme kinetic properties of C. reinhardtii on a genome-scale
Here we generated protein abundance data, covering between 2337 and 3708 proteins, from Chlamydomonas reinhardtii cells grown in various experiments and employed them with constraint-based metabolic models to estimate in vivo maximum apparent turnover numbers for this model organism.
ORGANISM(S): Escherichia coli 
2023-08-01 | PXD037599 | Pride
Chlamydomonas Proteomics 
ProteomicsIn vivo structure-function analysis and redox interactomes of Leishmania tarentolae Erv
Import and oxidative folding of proteins in the mitochondrial intermembrane space differ among eukaryotic lineages. While opisthokonts such as yeast rely on the receptor and oxidoreductase Mia40 in combination with the Mia40:cytochrome c oxidoreductase Erv, kinetoplastid parasites and other excavate...
ORGANISM(S): Leishmania tarentolae 
2021-07-09 | PXD027121 | Pride
Proteomics Silac Ip Leishmania tarentolae 
ProteomicsOverexpression of sedoheptulose-1,7-bisphosphatase enhances photosynthesis in Chlamydomonas reinhardtii and has no effect on the abundance of other Calvin-Benson cycle enzymes
The productivity of plants and microalgae needs to be increased to feed the growing world population and to promote the development of a low-carbon economy. This goal can be achieved by improving photosynthesis via genetic engineering. In this study, we have employed the Modular Cloning strategy to ...
ORGANISM(S): Chlamydomonas reinhardtii 
2021-02-11 | PXD018833 | Pride
Modular cloning Mass spectrometry Qconcat Photosynthesis Chlamydomonas reinhardtii Proteotypic peptide Synthetic biology 
ProteomicsA longer isoform of Stim1 is a negative SOCE regulator but increases cAMP modulated NFAT signaling
Alternative splicing is a potent modifier of protein function. Stromal interaction molecule 1 (Stim1) is the essential activator of store-operated Ca2+ entry (SOCE) triggering activation of transcription factors. Here, we characterize Stim1A, a splice variant with an additional 31 amino acid domain ...
ORGANISM(S): Homo sapiens (Human) 
2021-11-11 | PXD028974 | Pride
Orai Pip2 Splicing Nfat Pde8 
ProteomicsTopology of the redox network during induction of photosynthesis as revealed by time-resolved proteomics in tobacco
Employing a new time-resolved redox proteomic method, we have investigated the redox network in vivo during the dark-to-low-light transition. We show that redox states of some TRXs follow the photosynthetic linear electron transport rate. While some redox targets have kinetics compatible with an equ...
ORGANISM(S): Nicotiana tabacum (Common tobacco) 
2021-11-21 | PXD025217 | Pride
Tobacco Sds Labelling Quantitative Redox Lc-msms 
TranscriptomicsEffects of elevated seawater pCO2 on gene expression patterns in the gills of the green crab, Carcinus maenas
In order to promote our understanding of the responses of green crab acid-base regulatory epithelia to high pCO2, Baltic Sea green crabs were exposed to a pCO2 of 400 Pa for 3 and 7 days after which posterior gills 7 and 9 were sampled. Gills were then subsequently screened for differentially expres...
ORGANISM(S): Carcinus maenas 
2011-10-09 | E-GEOD-28870 | biostudies-arrayexpress
ProteomicsSystems-wide Analysis Revealed Shared and Unique Responses to Moderate and Acute High Temperatures in Green Alga Chlamydomonas reinhardtii
Different intensities of high temperatures affect plant growth and yield in the field, but the underlying mechanisms remain elusive. Using the unicellular green alga, Chlamydomonas reinhardtii, under highly controlled photobioreactor conditions, we revealed systems-wide shared and unique responses t...
ORGANISM(S): Chlamydomonas reinhardtii 
2022-06-09 | PXD027778 | Pride
Proteomics Chlamydomonas reinhardtii High temperatures Label free 
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