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ProteomicsDSSO,Xlink,LC-MSMS - DSSO as linker, study of protein-protein interaction by LC-MSMS
DSSO as linker, study of protein-protein interaction by LC-MSMS
ORGANISM(S): Streptococcus pyogenes STAB901 
2020-04-15 | PXD012466 | Pride
Xlink Dsso Lc-msms 
ProteomicsDSSO,Xlink,LC-MSMS - DSSO as linker, study of protein-protein interaction by LC-MSMS
DSSO as linker, study of protein-protein interaction by LC-MSMS
ORGANISM(S): Homo sapiens (Human) 
2021-09-09 | PXD019713 | Pride
Dsso as linker Study of protein-protein interaction by lc-msms 
ProteomicsSystematic Discovery of Deeply Conserved Plant Protein Complexes, DSSO-crosslinked soy (Glycine max)
The associated files are mass spec data from size exclusion chromatography fractions that were subsequently crosslinked with DSSO. The starting material was a native extract prepared from soy sprouts (Glycine max). The mass spectrometry used a data-dependent MS2-MS3 method to identify crosslinks.
ORGANISM(S): Glycine max 
2019-10-28 | PXD013704 | Pride
Cross link Xlinkx Cl-ms Glycine max Dsso Xl-ms Cf-ms Soy Sec 
ProteomicsNHS Carbamate Cross-Linkers Provide Complementary XL-MS Restraints via Preferential N-Terminal Targeting
Cross-linking mass spectrometry (XL-MS) has become a valuable tool for investigating the structural morphology and plasticity of proteins. Traditional cross-linkers contain two N-hydroxy succinimide (NHS) esters that mainly react with lysine residues. In this work, we optimized the in-solution react...
ORGANISM(S): Bos taurus (Bovine) Homo sapiens (Human) 
2026-03-30 | PXD069252 | Pride
Crosslinking ms Cross-linking ms Dsso carbamate Nhs carbamate cross-linkers N-terminal reactivity Xl-ms Cross-linking mass spectrometry Ms-cleavable cross-linkers 
ProteomicsStructural surfaceomics of Nomo-1 using DSSO cross-linker with MS3 approach
The project aimed to profile the cell surface proteins of Nomo-1 (AML cell line) using structural surfaceomics for identification of protein conformation-based cancer antigens thereby expanding the toolkit for cancer target discovery for immunotherapeutic targeting. To achieve the goal, cell surface...
ORGANISM(S): Homo sapiens (Human) 
2023-10-04 | PXD035589 | Pride
Ms3 Dsso Xl-ms Cell surfaceome Nomo-1 Aml 
ProteomicsA3G-Vif-CBFB-CRL5 Cross-Linking with DSSO
Here we use an optimization cross-linking mass spectrometry (XL-MS) pipeline for the structural characterization of a dynamic HIV-host protein complex. Using DSSO-based XL-MS analysis, residue-protein proximity restraints based on functional genetics, and integrative modeling, we define the structu...
ORGANISM(S): Homo sapiens (Human) Human immunodeficiency virus 
2021-11-03 | PXD025391 | Pride
Xl-ms Dsso Apobec3g Hiv vif Integrative modeling 
Proteomicsstudy of protein-protein interaction by LC-MSMS
DSSO as linker, study of protein-protein interaction by LC-MSMS
ORGANISM(S): Homo sapiens (Human) 
2021-09-09 | PXD019868 | Pride
Xlink Dsso Lc-msms 
Proteomicsstudy of protein-protein interaction by LC-MSMS(28)
DSSO as linker, study of protein-protein interaction by LC-MSMS
ORGANISM(S): Homo sapiens (Human) 
2021-09-09 | PXD019944 | Pride
Xlink Dsso Lc-msms 
ProteomicsMonolinks Matter: Rational Modification of a Cross-Linker for Improved Flexible Protein Structure Modeling
Chemical cross-linking/mass spectrometry (XL-MS) has emerged as a complementary tool for mapping interaction sites within protein networks as well as gaining moderate-resolution native structurale insight with minimal interference. XL-MS technology mostly relies on chemoselective reactions (crosslin...
ORGANISM(S): Homo sapiens (Human) 
2025-05-06 | PXD051742 | Pride
Protein structure Alphafold Crosslink Dsso-carbamate Monolink 
ProteomicsCX-MS of DSSO-cross-linked A2M - Structural investigations of human α2-macroglobulin elucidate its native conformation and inhibitory mechanism
Human A2M was cross-linked with DSSO in its native, methylamine-treated, and trypsin-cleaved conformations. The monomer, dimer, and tetramer SDS-PAGE gel bands of native A2M were analyzed by in-gel digest. Total protein digests of all three conformations were analyzed and compared.
ORGANISM(S): Homo sapiens (Human) 
2021-05-21 | PXD019101 | Pride
Human a2m dsso 
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