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ProteomicsArabidopsis thaliana PSS1 TurboID C-teminal fusion
Arabidopsis, PSS1, miniTurbo, proximity labeling, nonhost resistance, Phytophthora sojae, protein interactome, mass spectrometry
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) Phytophthora sojae 
2026-06-11 | PXD065664 | Pride
Nonhost resistance Arabidopsis Protein interactome Mass spectrometry Proximity labeling Pss1 Miniturbo Phytophthora sojae 
ProteomicsArabidopsis thaliana PSS1 TurboID N-teminal fusion
The Arabidopsis PSS1 gene, which encodes a glycine-rich protein, plays a pivotal role in nonhost resistance to the soybean oomycete Phytophthora sojae and the fungal pathogen Fusarium virguliforme. To elucidate the molecular basis of PSS1-mediated immunity, we employed miniTurbo-based proximity labe...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) Phytophthora sojae 
2026-06-11 | PXD065660 | Pride
Nonhost resistance Arabidopsis Protein interactome Proximity labeling Pss1 Miniturbo Phytophthora sojae 
ProteomicsMiniTurbo-based interactomics of two plasma membrane-localized SNARE proteins in Marchantia polymorpha
• Marchantia polymorpha is a model liverwort and its overall low genetic redundancy is advantageous for dissecting complex pathways. Proximity-dependent in vivo biotin-labelling methods have emerged as powerful interactomics tools in recent years. However, interactomics studies applying proximity la...
ORGANISM(S): Marchantia polymorpha 
2022-04-01 | PXD030429 | Pride
Snare protein Interactomics Membrane-trafficking Miniturbo Proximity labelling Marchantia polymorpha 
UnknownA novel miniTurbo knock-in mouse reveals a protein interaction network of USP46 in the brain.
Not available
S-EPMC12826572 | biostudies-literature
ProteomicsInteractome characterization of DEPTOR using miniTurbo
MS files for the miniTurbo characterization of DEPTOR in human cells.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2021-03-16 | MSV000087055 | MassIVE
ProteomicsProximity labelling of the post-Golgi AP complexes in Plasmodium falciparum
Adaptor protein (AP) complexes are pivotal components of the post-Golgi trafficking and endocytosis process and are involved in the selection, package and sorting of cargo into vesicles to different destination compartments in eukaryotic cells. The main objective of this project was to investigate t...
ORGANISM(S): Plasmodium falciparum (isolate 3D7) 
2025-09-17 | PXD062862 | Pride
Adaptor protein (ap) complexes Malaria Vesicular trafficking. Miniturbo Proximity labelling Plasmodium falciparum Sli Diq-bioid 
ProteomicsDynamic proximity based interactome of the transcription factor RELA to identify gene-regulatory networks revealed
Using p65-miniTurbo fusion proteins in HeLa cells, we identified by biotin tagging > 350 RELA interactors from untreated and IL-1a-stimulated cells, including many TFs (47 % of all interactors) and > 50 epigenetic regulators belonging to different classes of chromatin remodeling complexes.
ORGANISM(S): Homo sapiens (Human) 
2024-11-04 | PXD045888 | Pride
Lc-msms Rela Affinity proteomics Turbo id Genetic networks P65 nf-kb Interactome 
ProteomicsProximity proteomics on RPE1 stable cell lines with miniTurbo-p62 and ATG5 Knock-down to investigate p62 filaments and calcium-rich p62-enwrapped lipid droplets
The selective autophagy receptor p62/SQSTM1 (from hereon p62) is known to form higher-order filaments in vitro and to undergo liquid-liquid phase separation when mixed with poly-ubiquitin. We determined the full-length cryo-EM structure of p62 and elucidated a structured double helical filament scaf...
ORGANISM(S): Homo sapiens (Human) 
2025-12-08 | PXD066163 | Pride
Human Lc-ms Biotinylation Miniturbo Atg5 kd 
ProteomicsProteomics after labeling the vicinity of UNC-45 using miniTurbo and TurboID biotin ligases followed by streptavidin pull-down under non-stress and optogenetically induced mechanical muscle stress (OptIMMuS).
This project includes two proximity labeling experiments, one to establish the vicinity of UNC-45 under non-stress conditions and one to examine changes in the vicinity of UNC-45 under optogenetically induced mechanical muscle stress. The first non-stress experiment consists of 15 samples after biot...
ORGANISM(S): Caenorhabditis elegans 
2024-07-16 | PXD045081 | Pride
C. elegans Optogenetics Unc-45 Proximity labelling Mechanical stress Muscle 
ProteomicsHepatic palmitoyl-proteomes and acyl-protein thioesterase protein proximity networks link lipid modification and mitochondria
Elevated fatty acids are associated with insulin resistance. Fatty acids can reversibly modify proteins through a process known as S-palmitoylation. To test the hypothesis that depalmitoylation by acyl-protein thioesterases 1 and 2 (APT1 and APT2) in the liver regulates glucose metabolism, we genera...
ORGANISM(S): Mus musculus (Mouse) 
2023-11-05 | PXD041552 | Pride
Lipid Proteomics Palmitoylation Mitochondria Proximity networks 
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