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ProteomicsA synthetically methylotrophic Escherichia coli as a chassis for bioproduction
Proteome characterization of three E. coli strains: a methanol-dependent strain (MEvo1-0) and two synthetically methylotrophic strains (MEcoli_ref_1, MEcoli_ref_2)
ORGANISM(S): Escherichia coli 
2024-02-08 | PXD046243 | Pride
Synthetic biology Metabolic engineering Synthetic methylotrophy Biotechnology E. coli 
TranscriptomicsTranscription profiling of spermatogenesis in juvenile mouse testis and analysis of four germ cell deficient mouse models, time series
Temporal study of the first wave of spermatogenesis in juvenile mouse testis and analysis of four germ cell deficient mouse models.
A series of purified testis cell-types (McCarrey libraries)constituting a focussed gene set was exploited to examine gene expression in prepubertal mouse testis. T...
ORGANISM(S): Mus musculus 
2006-08-10 | E-MEXP-571 | biostudies-arrayexpress
ProteomicsNogo-A modulates gene expression to fine-tune enamel development
Nogo-A is a major player in neural development and regeneration, and it is the target of several clinical trials. However, its functions outside the nervous system are mostly unknown. We observed that Nogo-A is expressed in dental epithelial cells, responsible for the formation of enamel, and we sho...
ORGANISM(S): Mus musculus (Mouse) 
2024-06-20 | PXD030386 | Pride
Differentiation Amelogenesis Lc-ms Tooth Interactome Nogo-a Development Enamel Transcriptome Dda 
ProteomicsHarnessing PROTAC technology to combat stress hormone receptor activation
We want to quantify the proteome alteration following PROTAC mediated Glucocorticoid receptor depletion in vitro.
ORGANISM(S): Homo sapiens (Human) 
2023-12-11 | PXD046949 | Pride
Gr protac A549 Lc-ms/ms 
ProteomicsCharacterization of stromal cells isolated from endometriotic lesions
Endometriosis shows significant lesion heterogeneity, but pathophysiological mechanisms leading to differences in clinical presentation are poorly understood. Here we utilized primary stromal cells from different types of endometriotic lesions to better understand the molecular mechanisms that lead ...
ORGANISM(S): Homo sapiens (Human) 
2025-12-15 | PXD066685 | Pride
Eutopic and ectopic endometrial cells Endometriosis Endometrioma Superficial endometriosis Endometrium Endometriotic stromal cells Homo sapiens Deep endometriosis 
ProteomicsDysregulated lipid metabolism and hypomyelination in postnatal peroxisome-deficient Pex2 knockout Zellweger mice
In the project “Dysregulated lipid metabolism and hypomyelination in postnatal peroxisome-deficient Pex2 knockout Zellweger mice” label-free mass spectrometry proteomics was used to study the proteome in different regions of the central nervous system of wild-type and peroxisome-deficient Pex2 knock...
ORGANISM(S): Mus musculus (Mouse) 
2026-01-28 | PXD063585 | Pride
Peroxisomes Brain Pex2 knockout mouse Cerebral cortex Cholesterol Cerebellum Cns Myelination Brainstem Zellweger syndrome Spinal cord Lc-ms/ms 
ProteomicsLongitudinal Drain-Fluid Proteomics Reveals Procedure-Specific Signatures of Postoperative Leakage after Pancreatic and Colorectal Surgery
Anastomotic leakage is a major complication after gastrointestinal surgery, yet early detection remains limited by nonspecific clinical signs and narrow biomarker panels. Here, we used longitudinal data-independent acquisition proteomics to profile postoperative drain fluid from two surgical cohorts...
ORGANISM(S): Homo sapiens (Human) 
2026-09-08 | PXD082236 | Pride
Anastomotic leakage Lc-ms based proteomics Drain-fluid Pancreatic and colorectal surgery Longitudinal profiling 
ProteomicsLongitudinal Drain-Fluid Proteomics Reveals Procedure-Specific Signatures of Postoperative Leakage after Pancreatic and Colorectal Surgery
Anastomotic leakage is a major complication after gastrointestinal surgery, yet early detection remains limited by nonspecific clinical signs and narrow biomarker panels. Here, we used longitudinal data-independent acquisition proteomics to profile postoperative drain fluid from two surgical cohorts...
ORGANISM(S): Homo sapiens (Human) 
2026-09-08 | PXD082170 | Pride
Anastomotic leakage Lc-ms based proteomics Drain-fluid Pancreatic and colorectal surgery Longitudinal profiling 
ProteomicsEnhanced Media Optimize Bovine Myogenesis in 2D and 3D Models for Cultivated Meat Applications
Livestock farming and conventional meat production pose significant environmental, health, and animal welfare challenges. In seeking sustainable alternative solutions, cultivated meat technology typically utilizes differentiation of myogenic progenitor cells (MPCs) into muscle cells for in vitro mea...
ORGANISM(S): Bos taurus (Bovine) 
2025-07-24 | PXD051019 | Pride
Multiomics Cultivated meat Bovine 
UnknownA National Survey of Burnout and Depression Among Fellows Training in Pulmonary and Critical Care Medicine: A Special Report by the Association of Pulmonary and Critical Care Medicine Program Directors.
Not available
S-EPMC7856531 | biostudies-literature
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