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ProteomicsProtein Corona of 60nm Silver Nanoparticles
We studied the composition of the protein corona formed on 60 nm silver nanoparticles with citrate coating interacted with the human blood plasma under various pH and temperature conditions. The protein corona was analyzed using LC-MS and label-free quantitation.
ORGANISM(S): Homo sapiens (Human) 
2019-01-23 | PXD007648 | Pride
Ag Lfq Nanoparticle Protein corona 
ProteomicsSuperQuant: a Data Processing Approach to Increase Quantitative Proteome Coverage
SuperQuant is a quantitative proteomics data processing workflow that utilizes fragment ion complementarity to identify multiple co-isolated peptides in tandem mass spectra. Parent ion and label-free quantification method are supported. The performance of the developed approach was tested using dime...
ORGANISM(S): Homo sapiens (Human) 
2015-05-26 | PXD001907 | Pride
Data processing Post-aquisition Hela Complementary ions Lc-msms 
ProteomicsIn vitro blood-brain barrier model proteome influenced by silver nanoparticles
Silver nanoparticles (AgNP) have been reported to penetrate the central nervous system and induce neurotoxicity. However, there is paucity in understanding the toxicity of AgNPs and their effect on the blood-brain barrier (BBB) including the underlying molecular mechanism(s) of action. Using an in v...
ORGANISM(S): Homo sapiens (Human) 
2018-11-07 | PXD009197 | Pride
Silver Tmt Lc-ms Nanoparticles Human Blood-brain barrier 
ProteomicsMale accessory glands of Apis melifera drones
Protein content of Apis melifera drone male accessory glands (cornua, bulbus and seminal vesicle) investigated by high resolution MS
ORGANISM(S): Apis mellifera (Honeybee) 
2015-05-12 | PXD001993 | Pride
Bulbus Lc-ms Common bee Drone Reproductive system Cornua Apis melifera Seminal vesicle De novo 
ProteomicsGlucose-dependent insulinotropic polypeptide effects in type 1 diabetes
Glucose-dependent insulinotropic polypeptide (GIP) has been proposed to exert insulin-independent effects on lipid and bone metabolism. We investigated the effect of a 6-day s.c. GIP infusion on circulating lipids, white adipose tissue (WAT), brown adipose tissue (BAT), hepatic fat content, and infl...
ORGANISM(S): Homo sapiens (Human) 
2022-11-08 | PXD034803 | Pride
Human Multiomics Blood plasma Diabetes 
ProteomicsQuantitative proteomic analysis of glioblastoma subpopulations
Three glioblastoma subpopulations were analyzed by quantitative proteomics, using dimethyl labeling approach. Deconvolution of mixture spectra using SuperQuant software was employed to increase the depth of quantification.
ORGANISM(S): Homo sapiens (Human) 
2018-03-08 | PXD005245 | Pride
Glioblastoma Superquant Shotgun proteomics Cancer Lcms 
ProteomicsRetention time calibration for RP-HPLC at pH 9
The change in pH of the mobile phase drastically changes the retention mechanism of peptides, rendering currently available retention time prediction models useless. The aim of this study is to create a dataset of peptide retention times under basic (pH 9) HPLC conditions, allowing for the creation ...
ORGANISM(S): Homo sapiens (Human) 
2026-02-13 | PXD064311 | Pride
Hela Basic ph Rp-hplc 
ProteomicsSilver and platinum nanoparticles synergy
In this study, we compared the effects of silver and platinum NPs on the main components of the blood brain barrier model: human cerebral microvascular endothelial cells (hCMEM/D3) and human primary astrocytes under single and co-exposure NP conditions. The co-exposure to two types of NPs synergisti...
ORGANISM(S): Homo sapiens (Human) 
2022-11-08 | PXD014425 | Pride
Platinum Astrocytes Blood brain barrier Endothelial cells Silver Nanoparticles Synergy Cytotoxicity 
ProteomicsScoelicolor A3(2) - Whole organism, normlized TMT (Rioserasetal,molcellproteomics2018)
abundance based on normlized TMT, Interaction consistency score: 8.2, Coverage: 45
ORGANISM(S): 100226 
2018-00-00 | 3141927513 | PAXDB
ProteomicsScoelicolor A3(2) - Whole organism, SC (Rioserasetal,molcellproteomics2018)
abundance based on Spectral counting, Interaction consistency score: 11.4, Coverage: 45
ORGANISM(S): 100226 
2018-00-00 | 3401610947 | PAXDB
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