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ProteomicsFumarate effect on the Escherichia coli proteome at aerobic and anaerobic growth conditions
The changes in protein composition of E. coli were studied in a global proteomic approach for aerobic growth without or with fumarate as carbon source (glycerol + O2, fumarate + O2, respectively) and anaerobic growth without or with fumarate as carbon source (glycerol + DMSO, glycerol + DMSO + fumar...
ORGANISM(S): Escherichia coli 
2019-11-20 | PXD011760 | Pride
Escherichia coli  fumarate metabolism Aerobic/anaerobic growth  c4-dicarboxylates Lc-udmse 
ProteomicsSex-specific extracellular protein composition derived from oligodendrocyte progenitor cells (OPC) under normoxic and hyperoxic conditions
Secretory proteins and extracellular vesicles (EVs) are increasingly recognized as important mediators of intercellular communication and stress response in the brain. Our analysis of the secretome from cell culture supernatants obtained after treating male and female derived primary mouse OPCs with...
ORGANISM(S): Mus musculus (Mouse) 
2025-09-29 | PXD060307 | Pride
Normoxia Mouse Hyperoxia Opc Secretome lc-ms/ms 
ProteomicsOxygen and hormone effect on rat oligodrendrocyte progenitor cell line (OLN93)
Hyperoxia is known to cause cerebral white matter injury in preterm infants. Preterm birth is also associated with sudden hormonal changes which includes drop of estrogen level and increased postnatal production of fetal zone steroids (FZS). Therefore, we investigated the effect of hyperoxia (80...
ORGANISM(S): Rattus norvegicus (Rat) 
2022-05-16 | PXD031878 | Pride
Oligodendrocyte progenitor cell line Hyperoxia Fetal zone steroids Lc-ms/ms 
ProteomicsComparative proteomic profiling of neonatal rat ventricular cardiomyocytes (NRVCMs) following TRIM24 overexpression
TRIM24 (Tripartite Motif-Containing 24) is a key transcriptional co-regulator involved in various cellular processes, including chromatin remodeling and gene expression. However, its role in cardiomyocytes remains largely unexplored. In this study, we investigated the global proteomic changes associ...
ORGANISM(S): Rattus norvegicus (Rat) 
2025-07-14 | PXD064832 | Pride
Trim24 Rat Neonatal rat ventricular cardiomyocytes Lc-ms/ms 
ProteomicsCharacterization of TAp73α protein interaction partners
The human osteosarcoma cell line SaOs2 was transduced with adenoviral vectors expressing TAp73α. Subsequent Co-IP/MS analysis characterised the p73 isoform-specific interactome. The raw data include identified cofactors and provide a basis for further research into p73-associated complexes.
ORGANISM(S): Homo sapiens (Human) 
2025-08-07 | PXD058816 | Pride
Tap73α Saos-2 Lc-ms/ms 
ProteomicsLC-MS/MS of differentiated bone marrow and Yolk sac macrophages
We immortalized hematopoietic progenitors from Yolk sac (YS) and bone marrow (BM) using conditional homeobox protein Hox-B8 (Hoxb8) and carried out global protein profiling using a bottom-up approach.
ORGANISM(S): Mus musculus (Mouse) 
2025-08-07 | PXD026916 | Pride
Lc-ms/ms Hoxb8 Bone marrow Yolk sac Macrophages 
ProteomicsProteomic profiling of saliva of periodontally healthy and diseased individuals in young and old age matched groups
We used whole saliva samples from periodontally healthy and diseased subjects with chronic periodontitis of to age groups (35–44 years old- group A and B, and 55-64 years old- group C and D) to screen for disease-associated differences in the protein pattern.
ORGANISM(S): Homo sapiens (Human) 
2026-06-29 | PXD068002 | Pride
Lc-udmse Age dependency Saliva Periodontitis 
ProteomicsCharacterization of DNp73β protein interaction partners
The human osteosarcoma cell line SaOs2 was transduced with adenoviral vectors expressing DNp73β. Subsequent Co-IP/MS analysis characterised the p73 isoform-specific interactome. The raw data include identified cofactors and provide a basis for further research into p73-associated complexes.
ORGANISM(S): Homo sapiens (Human) 
2025-08-07 | PXD058814 | Pride
Saos-2 Dnp73β Lc-ms/ms 
ProteomicsImpact of FGF-2 and FGF-2 containing cell culture supernatants on the intracellular protein composition of ReNcell derived neuron
FGF-2 is an important protein involved in a vast number of molecular pathways and a number of cellular functions including glial cell differentiation and response to axon injury. This protein was found to be present significantly in supernatants of female derived murine oligodendrocyte progenitor ce...
ORGANISM(S): Homo sapiens (Human) 
2025-09-29 | PXD060285 | Pride
Human neural progenitor cell line Rencell vm Opc cell culture supernatant Fgf-2 Secretome lc-ms/ms 
ProteomicsDifferential impact of LPS and LTA stimulation on differentiated bone marrow and Yolk sac Hoxb8 macrophages
The impact of LPS and LTA stimulation on differentiated bone marrow and Yolk sac Hoxb8 macrophages in comparison to untreated control cells was studied by global protein profiling using a bottom-up approach.
ORGANISM(S): Mus musculus (Mouse) 
2022-02-04 | PXD026922 | Pride
Lps Lc-ms/ms Hoxb8 Bone marrow Yolk sac Lta Macrophages 
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